Gene: Solyc12g042080.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g042080.2
  • Transcript Identifier Solyc12g042080.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 56759147-56761544 : negative

Gene Family Information

  • ID HOM05D000894
  • #Genes/#Species 670/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g042080.2.1
  • uniprot A0A3Q7J977
  • gene_id Solyc12g042080

Descriptions

  • Description 40S ribosomal protein S11 (AHRD V3.3 *** A0A2G2YII0_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G48930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G48930
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G48930
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G48930
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G48930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028333 Ribosomal protein S17, archaeal/eukaryotic
IPR000266 Ribosomal protein S17/S11
IPR012340 Nucleic acid-binding, OB-fold
IPR032440 40S ribosomal protein S11, N-terminal
Mapman id Description
17.1.3.1.12 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS11