Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p18070 Brassica napus
A09p18090 Brassica napus
A09p18100 Brassica napus
A09p18110 Brassica napus
A09p18120 Brassica napus
A09p18130 Brassica napus
A09p18140 Brassica napus
Aa31LG10G330 Aethionema arabicum
Aa31LG4G9560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1783 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3333 Anthoceros agrestis
Actinidia08295 Actinidia chinensis
Actinidia08317 Actinidia chinensis
Actinidia10269 Actinidia chinensis
Actinidia19252 Actinidia chinensis
Actinidia19253 Actinidia chinensis
Actinidia21207 Actinidia chinensis
Actinidia21208 Actinidia chinensis
Actinidia21209 Actinidia chinensis
Actinidia21213 Actinidia chinensis
Actinidia21217 Actinidia chinensis
Actinidia29657 Actinidia chinensis
Actinidia33287 Actinidia chinensis
Actinidia35404 Actinidia chinensis
Actinidia35405 Actinidia chinensis
Actinidia37147 Actinidia chinensis
Actinidia37148 Actinidia chinensis
Actinidia37149 Actinidia chinensis
Actinidia37150 Actinidia chinensis
Actinidia37151 Actinidia chinensis
Ah.05g171530 Amaranthus hybridus
Ah.06g181550 Amaranthus hybridus
AL1G63980 Arabidopsis lyrata
AL8G23550 Arabidopsis lyrata
Aqoxy5G01343 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1XPG7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3KGV08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62V247 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7NI5NY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI62AJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EG2WXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0605Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS3G0C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMZ0WK Arachis hypogaea
AT1G55860 Arabidopsis thaliana
AT1G70320 Arabidopsis thaliana
ATR0767G187 Amborella trichopoda
Atru.chr13.975 Acer truncatum
Atru.chr13.976 Acer truncatum
Atru.chr13.977 Acer truncatum
Atru.chr13.978 Acer truncatum
Atru.chr13.979 Acer truncatum
Atru.chr2.3698 Acer truncatum
Atru.chr2.3699 Acer truncatum
AUR62014369 Chenopodium quinoa
AUR62017118 Chenopodium quinoa
AUR62019112 Chenopodium quinoa
AUR62036471 Chenopodium quinoa
BcaB05g23932 Brassica carinata
BcaB07g31165 Brassica carinata
BcaB07g31166 Brassica carinata
BcaC04g22166 Brassica carinata
BcaC04g22167 Brassica carinata
BcaC04g22169 Brassica carinata
BolC9t55169H Brassica oleracea
BolC9t55170H Brassica oleracea
BolC9t55172H Brassica oleracea
BolC9t55173H Brassica oleracea
BolC9t55174H Brassica oleracea
BolC9t55175H Brassica oleracea
BolC9t55177H Brassica oleracea
BraA09t37439Z Brassica rapa
BraA09t37441Z Brassica rapa
BraA09t37443Z Brassica rapa
BraA09t37445Z Brassica rapa
BraA09t37446Z Brassica rapa
BraA09t37447Z Brassica rapa
BraSC56t46399Z Brassica rapa
C09p22520 Brassica napus
C09p22540 Brassica napus
C09p22560 Brassica napus
C09p22570 Brassica napus
C09p22590 Brassica napus
C09p22600 Brassica napus
CAN.G193.8 Capsicum annuum
CAN.G623.17 Capsicum annuum
CANSAT11G0765 Cannabis sativa
CARHR045560 Cardamine hirsuta
CARHR259180 Cardamine hirsuta
Carub.0001s4443 Capsella rubella
Carub.0008s0954 Capsella rubella
Ca_05473_v3 Cicer arietinum L.
Ca_18240_v3 Cicer arietinum L.
Ca_18244_v3 Cicer arietinum L.
CBR_g8951 Chara braunii
Cc05_g15020 Coffea canephora
Cc10_g08380 Coffea canephora
CDE04G0044 Ceratophyllum demersum
CDE04G1670 Ceratophyllum demersum
CDE05G0803 Ceratophyllum demersum
CDE07G0942 Ceratophyllum demersum
CDE07G1476 Ceratophyllum demersum
Cfa013814 Carpinus fangiana
Cfa016908 Carpinus fangiana
Ciclev10000001m.g Citrus clementina
Ciclev10007219m.g Citrus clementina
CiPaw.07G163100 Carya illinoinensis
CiPaw.08G057100 Carya illinoinensis
CiPaw.11G204500 Carya illinoinensis
CiPaw.12G138800 Carya illinoinensis
CiPaw.12G138900 Carya illinoinensis
ClCG08G011550 Citrullus lanatus
ClCG10G004420 Citrullus lanatus
COL.COLO4_09844 Corchorus olitorius
COL.COLO4_35278 Corchorus olitorius
Cpa.g.sc21.42 Carica papaya
Cpa.g.sc959.1 Carica papaya
Cre01.g012450 Chlamydomonas reinhardtii
CsaV3_2G030130 Cucumis sativus L.
CsaV3_3G004200 Cucumis sativus L.
CSS0000386 Camellia sinensis var. sinensis
CSS0000660 Camellia sinensis var. sinensis
CSS0002100 Camellia sinensis var. sinensis
CSS0007399 Camellia sinensis var. sinensis
CSS0012817 Camellia sinensis var. sinensis
CSS0021377 Camellia sinensis var. sinensis
CSS0022525 Camellia sinensis var. sinensis
CSS0034444 Camellia sinensis var. sinensis
CSS0037654 Camellia sinensis var. sinensis
DCAR_009555 Daucus carota
DCAR_017075 Daucus carota
DCAR_017532 Daucus carota
DCAR_020028 Daucus carota
Dinv10343 Davidia involucrata
Dinv10344 Davidia involucrata
Dinv10345 Davidia involucrata
Dinv40863 Davidia involucrata
Dinv42592 Davidia involucrata
Dinv42593 Davidia involucrata
Dinv44876 Davidia involucrata
Dinv44877 Davidia involucrata
Dinv44878 Davidia involucrata
Duzib041G0164 Durio zibethinus
Duzib093G1788 Durio zibethinus
Duzib116G0124 Durio zibethinus
Duzib213G0084 Durio zibethinus
Duzib268G0898 Durio zibethinus
ECA236G3808 Erigeron canadensis
ECA240G4674 Erigeron canadensis
ECA247G1373 Erigeron canadensis
ECA247G1822 Erigeron canadensis
ECA247G4116 Erigeron canadensis
EL10Ac1g00487 Beta vulgaris
EL10Ac4g07551 Beta vulgaris
Eucgr.F02042 Eucalyptus grandis
Eucgr.F02160 Eucalyptus grandis
FAN04G1446 Fragaria x ananassa
FAN08G0162 Fragaria x ananassa
FAN08G0746 Fragaria x ananassa
FAN08G1002 Fragaria x ananassa
FAN08G2863 Fragaria x ananassa
FAN11G2391 Fragaria x ananassa
FAN11G2606 Fragaria x ananassa
FAN16G1947 Fragaria x ananassa
FAN18G0248 Fragaria x ananassa
FAN21G2236 Fragaria x ananassa
FAN25G0789 Fragaria x ananassa
FvH4_3g42950 Fragaria vesca
FvH4_5g34290 Fragaria vesca
FvH4_5g35010 Fragaria vesca
Glyma.02G216000 Glycine max
Glyma.04G096900 Glycine max
Glyma.05G133100 Glycine max
Glyma.06G098700 Glycine max
Glyma.08G087600 Glycine max
Glyma.14G183000 Glycine max
Gohir.A01G092100 Gossypium hirsutum
Gohir.A05G218400 Gossypium hirsutum
Gohir.A05G264300 Gossypium hirsutum
Gohir.A06G030900 Gossypium hirsutum
Gohir.D01G062300 Gossypium hirsutum
Gohir.D05G221100 Gossypium hirsutum
Gohir.D05G266800 Gossypium hirsutum
Gohir.D06G030100 Gossypium hirsutum
Gorai.002G100900 Gossypium raimondii
Gorai.009G228200 Gossypium raimondii
Gorai.009G278900 Gossypium raimondii
Gorai.010G033100 Gossypium raimondii
GSVIVG01009206001 Vitis vinifera
GSVIVG01009208001 Vitis vinifera
GSVIVG01014697001 Vitis vinifera
GSVIVG01014698001 Vitis vinifera
HanXRQChr02g0045911 Helianthus annuus
HanXRQChr03g0073991 Helianthus annuus
HanXRQChr05g0163491 Helianthus annuus
HanXRQChr13g0408401 Helianthus annuus
Haze_09836 Corylus avellana
Haze_22488 Corylus avellana
Hma1.2p1_0010F.1_g006490 Hydrangea macrophylla
Hma1.2p1_0010F.1_g006500 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058695 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124060 Hydrangea macrophylla
HPP92_023769 Vanilla planifolia
HPP92_023770 Vanilla planifolia
HPP92_024547 Vanilla planifolia
HPP92_024548 Vanilla planifolia
HPP92_024549 Vanilla planifolia
HPP92_024550 Vanilla planifolia
HPP92_024551 Vanilla planifolia
HPP92_026406 Vanilla planifolia
HPP92_026407 Vanilla planifolia
HPP92_026408 Vanilla planifolia
HPP92_026409 Vanilla planifolia
Hund23101 Selenicereus undatus
Hund26826 Selenicereus undatus
Lalb_Chr04g0252751 Lupinus albus
Lalb_Chr04g0252761 Lupinus albus
Lalb_Chr07g0188331 Lupinus albus
Lalb_Chr08g0242601 Lupinus albus
Lalb_Chr11g0064861 Lupinus albus
Lalb_Chr12g0209101 Lupinus albus
Lalb_Chr17g0344621 Lupinus albus
Lalb_Chr23g0269951 Lupinus albus
Lalb_Chr23g0269961 Lupinus albus
Lj1C891T9 Lonicera japonica
Lj1g0021401 Lotus japonicus
Lj3C755T2 Lonicera japonica
Lj4C86T7 Lonicera japonica
Lj4g0006906 Lotus japonicus
LjContig00408g0027979 Lotus japonicus
Lsat_1_v5_gn_1_2001 Lactuca sativa
Lsat_1_v5_gn_1_98400 Lactuca sativa
Lsat_1_v5_gn_6_107380 Lactuca sativa
Lsat_1_v5_gn_8_95561 Lactuca sativa
Lsat_1_v5_gn_9_88720 Lactuca sativa
Manes.05G189200 Manihot esculenta
Manes.15G059000 Manihot esculenta
Manes.18G057015 Manihot esculenta
Mapoly0090s0059 Marchantia polymorpha
Mapoly0111s0008 Marchantia polymorpha
MBI16_g07279_MAGBIO Magnolia biondii
MBI16_g27902_MAGBIO Magnolia biondii
MCO16G050 Micromonas commoda
MD03G1027100 Malus domestica
MD08G1203000 Malus domestica
MD08G1203200 Malus domestica
MD11G1031000 Malus domestica
MD15G1388600 Malus domestica
Medtr3g099777 Medicago truncatula
Medtr4g094705 Medicago truncatula
Medtr4g094708 Medicago truncatula
Medtr5g066710 Medicago truncatula
MELO3C011072.2 Cucumis melo
MELO3C014115.2 Cucumis melo
Migut.M01647 Erythranthe guttata
MSTRG.24981 Avicennia marina
MSTRG.7001 Avicennia marina
Nitab4.5_0000131g0010 Nicotiana tabacum
Nitab4.5_0004583g0110 Nicotiana tabacum
Nitab4.5_0007779g0030 Nicotiana tabacum
Nitab4.5_0009446g0010 Nicotiana tabacum
Nn1g03156 Nelumbo nucifera
Nn1g05645 Nelumbo nucifera
Nn1g07530 Nelumbo nucifera
Nn5g27341 Nelumbo nucifera
Nn5g29819 Nelumbo nucifera
Nn8g39805 Nelumbo nucifera
Nn8g39844 Nelumbo nucifera
Oeu005482.1 Olea europaea
Oeu005956.1 Olea europaea
Oeu031931.1 Olea europaea
Oeu038170.1 Olea europaea
Oeu040883.2 Olea europaea
Os09g0252700 Oryza sativa ssp. japonica
Os09g0252800 Oryza sativa ssp. japonica
Os12g0428600 Oryza sativa ssp. japonica
Peaxi162Scf00139g00125 Petunia axillaris
Peaxi162Scf01112g00136 Petunia axillaris
PGR031G3206 Punica granatum
PGR083G1157 Punica granatum
PGSC0003DMG402022274 Solanum tuberosum
Phvul.002G189700 Phaseolus vulgaris
Phvul.008G183200 Phaseolus vulgaris
Phvul.009G034900 Phaseolus vulgaris
Phvul.010G047100 Phaseolus vulgaris
Potri.001G368600 Populus trichocarpa
Potri.002G110500 Populus trichocarpa
Potri.011G094100 Populus trichocarpa
Pp3c10_21040 Physcomitrium patens
Pp3c11_25020 Physcomitrium patens
Pp3c24_710 Physcomitrium patens
Pp3c7_8070 Physcomitrium patens
Pp3c7_8076 Physcomitrium patens
PRCOL_00000795 Prasinoderma coloniale
PRCOL_00003905 Prasinoderma coloniale
Prupe.1G535000 Prunus persica
Prupe.6G024400 Prunus persica
Psat0s2197g0280 Pisum sativum
Psat0s2502g0120 Pisum sativum
Psat2g064840 Pisum sativum
Psat5g049800 Pisum sativum
Psat7g085720 Pisum sativum
PSO017G1515 Papaver somniferum
PSO170G1658 Papaver somniferum
PSO210G0754 Papaver somniferum
PSO541G0267 Papaver somniferum
PSO675G3434 Papaver somniferum
QL08p003927 Quercus lobata
QL09p018620 Quercus lobata
RcHm_v2.0_Chr5g0077001 Rosa chinensis
RcHm_v2.0_Chr7g0234861 Rosa chinensis
Rhsim04G0012200 Rhododendron simsii
Rhsim07G0213300 Rhododendron simsii
Sabra02G0087000 Salix brachista
Sabra16G0241700 Salix brachista
SalBow7G0174 Salvia bowleyana
SalBow8G1875 Salvia bowleyana
SalBow8G2156 Salvia bowleyana
SalBow8G3694 Salvia bowleyana
SalBow8G4314 Salvia bowleyana
Sc03g0006760 Simmondsia chinensis
Sc03g0011480 Simmondsia chinensis
Sc15g0003080 Simmondsia chinensis
Sed0006720 Sechium edule
Sed0015542 Sechium edule
Sed0017501 Sechium edule
SEGI_10423 Sequoiadendron giganteum
SEGI_19221 Sequoiadendron giganteum
SEGI_41270 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07075 Striga asiatica
SGA_v2.0_scaffold168G38567 Striga asiatica
SGA_v2.0_scaffold171G38855 Striga asiatica
SGA_v2.0_scaffold74G24548 Striga asiatica
SHI26483 Sapria himalayana
SMO137G0018 Selaginella moellendorffii
SMO197G0019 Selaginella moellendorffii
SMO367G0244 Selaginella moellendorffii
Solyc04g076620.4 Solanum lycopersicum
Solyc07g065630.4 Solanum lycopersicum
Sopen04g030340 Solanum pennellii
Sopen07g033840 Solanum pennellii
Sp1g41460 Schrenkiella parvula
Sp6g10940 Schrenkiella parvula
TAR256G0007 Trochodendron aralioides
TAR256G0008 Trochodendron aralioides
TAR381G0008 Trochodendron aralioides
TAR624G0765 Trochodendron aralioides
TAR625G1466 Trochodendron aralioides
TAR626G0075 Trochodendron aralioides
THA.LOC104799856 Tarenaya hassleriana
THA.LOC104815693 Tarenaya hassleriana
THA.LOC104822729 Tarenaya hassleriana
Thecc.07G012100 Theobroma cacao
Thecc.08G073800 Theobroma cacao
Thhalv10011171m.g Eutrema salsugineum
Thhalv10011172m.g Eutrema salsugineum
TPR.G30874 Trifolium pratense
TPR.G31239 Trifolium pratense
TPR.G6372 Trifolium pratense
TWI12G0371 Tripterygium wilfordii
TWI38G1048 Tripterygium wilfordii
TWI38G2292 Tripterygium wilfordii
TWI56G1479 Tripterygium wilfordii
unitig_62.g23303 Utricularia gibba
unitig_62.g23304 Utricularia gibba
vmacro04636 Vaccinium macrocarpon
vmacro09645 Vaccinium macrocarpon
Zm00001eb094520 Zea mays
Zm00001eb133420 Zea mays
Zm00001eb409870 Zea mays

User provided reference genes

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