Gene: Pp3c11_25020

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c11_25020
Transcript Identifier Pp3c11_25020V3.1
Gene Type Coding gene
Location Chr11 : 16320404-16338642 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000747
#Genes/#Species 780/100
Phylogenetic origin

ID ORTHO05D001683
#Genes/#Species 370/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

name Pp3c11_25020V3.1
pacid 32958333
alias Pp1s138_130V6
alias Phpat.011G099300
alias Phypa_137606
uniprot A0A2K1JW78

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT1G55860
GO:0016567	IBA IEA	GOA Database	protein ubiquitination
GO:0000209	IBA	GOA Database	protein polyubiquitination
GO:0045732	IBA	GOA Database	positive regulation of protein catabolic process
GO:0043161	IBA	GOA Database	proteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0061630	IBA	GOA Database	ubiquitin protein ligase activity
GO:0004842	IEA	GOA Database	ubiquitin-protein transferase activity
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0016740	IEA	GOA Database	transferase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IBA	GOA Database	cytoplasm
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G55860
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT1G55860
GO:0000151	ISO	PLAZA Integrative Orthology	ubiquitin ligase complex	AT1G55860
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT1G55860
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G70320

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011989	Armadillo-like helical
IPR025527	HUWE1/Rev1, ubiquitin binding region
IPR015940	Ubiquitin-associated domain
IPR000225	Armadillo
IPR035983	HECT, E3 ligase catalytic domain
IPR000569	HECT domain
IPR010309	E3 ubiquitin ligase, domain of unknown function DUF908
IPR010314	E3 ubiquitin ligase, domain of unknown function DUF913
IPR009060	UBA-like superfamily
IPR016024	Armadillo-type fold

Mapman id	Description
19.2.2.1.4.1.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)