Gene: Solyc07g065630.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g065630.4
  • Transcript Identifier Solyc07g065630.4.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 67163949-67173179 : positive

Gene Family Information

  • ID HOM05D000747
  • #Genes/#Species 780/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g065630.4.1
  • uniprot A0A3Q7HIV4
  • gene_id Solyc07g065630

Descriptions

  • Description E3 ubiquitin-protein ligase UPL2 (AHRD V3.3 *** A0A2G3C2F6_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
GOA Databaseprotein ubiquitination
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045732
IBA
GOA Databasepositive regulation of protein catabolic process
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G55860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G70320
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G55860
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT1G55860
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G55860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G55860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015940 Ubiquitin-associated domain
IPR010309 E3 ubiquitin ligase, domain of unknown function DUF908
IPR011989 Armadillo-like helical
IPR009060 UBA-like superfamily
IPR010314 E3 ubiquitin ligase, domain of unknown function DUF913
IPR016024 Armadillo-type fold
Mapman id Description
35.1 not assigned.annotated