Gene: TPR.G31239

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G31239
  • Transcript Identifier TPR.T32291
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG3 : 9825861-9843938 : negative

Gene Family Information

  • ID HOM05D000747
  • #Genes/#Species 780/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA32291.v2
  • id Tp57577_TGAC_v2_gene31239.v2
  • pacid 35990028
  • uniprot A0A2K3LH07

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G55860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G70320
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G55860
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT1G55860
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G55860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G55860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000569 HECT domain
IPR009060 UBA-like superfamily
IPR016024 Armadillo-type fold
IPR010314 E3 ubiquitin ligase, domain of unknown function DUF913
IPR011989 Armadillo-like helical
IPR035983 HECT, E3 ligase catalytic domain
IPR015940 Ubiquitin-associated domain
IPR025527 HUWE1/Rev1, ubiquitin binding region
IPR010309 E3 ubiquitin ligase, domain of unknown function DUF908
Mapman id Description
19.2.2.1.4.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)