Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p16760 Brassica napus
A04p06850 Brassica napus
A05p17130 Brassica napus
A07p13930 Brassica napus
A08p28280 Brassica napus
A09p41520 Brassica napus
A09p45650 Brassica napus
Aa31LG4G10310 Aethionema arabicum
Aa31LG5G21210 Aethionema arabicum
Aa31LG7G7300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.181 Anthoceros agrestis
Actinidia03905 Actinidia chinensis
Actinidia07933 Actinidia chinensis
Actinidia12388 Actinidia chinensis
Actinidia32061 Actinidia chinensis
Actinidia36633 Actinidia chinensis
Ah.14g082600 Amaranthus hybridus
AL1G37040 Arabidopsis lyrata
AL2G30090 Arabidopsis lyrata
AL2G30380 Arabidopsis lyrata
AL3G52070 Arabidopsis lyrata
AL4G32150 Arabidopsis lyrata
AL5G33320 Arabidopsis lyrata
AL8G29094 Arabidopsis lyrata
Aqoxy2G01019 Aquilegia oxysepala
Aqoxy3G00040 Aquilegia oxysepala
Aqoxy4G02693 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.64AR13 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YB5EX7 Arachis hypogaea
AT1G23260 Arabidopsis thaliana
AT1G70650 Arabidopsis thaliana
AT1G70660 Arabidopsis thaliana
AT2G36060 Arabidopsis thaliana
AT3G52560 Arabidopsis thaliana
ATR0564G002 Amborella trichopoda
ATR0579G145 Amborella trichopoda
ATR0772G091 Amborella trichopoda
Atru.chr11.457 Acer truncatum
Atru.chr8.1401 Acer truncatum
AUR62001533 Chenopodium quinoa
AUR62015059 Chenopodium quinoa
AUR62017516 Chenopodium quinoa
AUR62020249 Chenopodium quinoa
BcaB01g00358 Brassica carinata
BcaB02g08563 Brassica carinata
BcaB03g11930 Brassica carinata
BcaB03g14153 Brassica carinata
BcaB05g24601 Brassica carinata
BcaB07g32315 Brassica carinata
BcaC02g09247 Brassica carinata
BcaC03g15216 Brassica carinata
BcaC05g26234 Brassica carinata
BcaC06g35030 Brassica carinata
BcaC07g39191 Brassica carinata
BcaC07g39624 Brassica carinata
BcaC08g44238 Brassica carinata
BolC2t08845H Brassica oleracea
BolC4t25628H Brassica oleracea
BolC5t30945H Brassica oleracea
BolC6t36845H Brassica oleracea
BolC7t42573H Brassica oleracea
BolC8t49820H Brassica oleracea
BolC8t50400H Brassica oleracea
BraA02t06730Z Brassica rapa
BraA04t16386Z Brassica rapa
BraA05t20615Z Brassica rapa
BraA07t29148Z Brassica rapa
BraA08t34759Z Brassica rapa
BraA09t39643Z Brassica rapa
BraA09t40026Z Brassica rapa
C02p28020 Brassica napus
C04p40480 Brassica napus
C05p22470 Brassica napus
C06p16430 Brassica napus
C07p20480 Brassica napus
C08p21810 Brassica napus
C08p27850 Brassica napus
CAN.G1141.2 Capsicum annuum
CAN.G463.2 Capsicum annuum
CAN.G574.44 Capsicum annuum
CAN.G62.29 Capsicum annuum
CAN.G829.2 Capsicum annuum
CAN.G841.6 Capsicum annuum
CANSAT01G1873 Cannabis sativa
CANSAT64G2240 Cannabis sativa
CARHR023700 Cardamine hirsuta
CARHR063910 Cardamine hirsuta
CARHR130300 Cardamine hirsuta
CARHR162340 Cardamine hirsuta
Carub.0001s2284 Capsella rubella
Carub.0002s1739 Capsella rubella
Carub.0004s1780 Capsella rubella
Carub.0005s1897 Capsella rubella
Ca_11724_v3 Cicer arietinum L.
CBR_g29396 Chara braunii
Cc01_g08650 Coffea canephora
Cc06_g06310 Coffea canephora
Cc11_g07010 Coffea canephora
CDE02G3695 Ceratophyllum demersum
CDE05G3550 Ceratophyllum demersum
CDE08G0251 Ceratophyllum demersum
CDE11G1121 Ceratophyllum demersum
Cfa015007 Carpinus fangiana
Cfa016664 Carpinus fangiana
Ciclev10012997m.g Citrus clementina
Ciclev10017021m.g Citrus clementina
CiPaw.06G050400 Carya illinoinensis
CiPaw.09G018300 Carya illinoinensis
CiPaw.10G015000 Carya illinoinensis
ClCG01G006500 Citrullus lanatus
ClCG07G005750 Citrullus lanatus
ClCG10G018550 Citrullus lanatus
COL.COLO4_16575 Corchorus olitorius
COL.COLO4_29619 Corchorus olitorius
Cpa.g.sc104.68 Carica papaya
Cpa.g.sc2.210 Carica papaya
Cre05.g247600 Chlamydomonas reinhardtii
CsaV3_3G037700 Cucumis sativus L.
CsaV3_5G028100 Cucumis sativus L.
CsaV3_5G037040 Cucumis sativus L.
CSS0003224 Camellia sinensis var. sinensis
CSS0006740 Camellia sinensis var. sinensis
CSS0008110 Camellia sinensis var. sinensis
CSS0022248 Camellia sinensis var. sinensis
CSS0022968 Camellia sinensis var. sinensis
CSS0035599 Camellia sinensis var. sinensis
CSS0036377 Camellia sinensis var. sinensis
DCAR_007326 Daucus carota
DCAR_010319 Daucus carota
DCAR_012231 Daucus carota
DCAR_020723 Daucus carota
DCAR_020724 Daucus carota
Dinv12319 Davidia involucrata
Dinv18656 Davidia involucrata
Dinv22796 Davidia involucrata
Dinv28082 Davidia involucrata
Dinv31740 Davidia involucrata
Duzib093G1548 Durio zibethinus
Duzib106G0321 Durio zibethinus
Duzib128G1985 Durio zibethinus
Duzib248G0455 Durio zibethinus
Duzib251G0707 Durio zibethinus
Duzib268G0485 Durio zibethinus
ECA233G1967 Erigeron canadensis
ECA238G1925 Erigeron canadensis
ECA246G4704 Erigeron canadensis
ECA248G2104 Erigeron canadensis
EL10Ac7g16323 Beta vulgaris
Eucgr.B02955 Eucalyptus grandis
Eucgr.G02684 Eucalyptus grandis
FAN02G3883 Fragaria x ananassa
FAN05G3752 Fragaria x ananassa
FAN07G2421 Fragaria x ananassa
FAN09G0028 Fragaria x ananassa
FAN11G2827 Fragaria x ananassa
FAN12G2729 Fragaria x ananassa
FAN14G4078 Fragaria x ananassa
FAN16G3715 Fragaria x ananassa
FAN17G1867 Fragaria x ananassa
FAN21G0950 Fragaria x ananassa
FAN22G1562 Fragaria x ananassa
FAN25G3851 Fragaria x ananassa
FvH4_3g25890 Fragaria vesca
FvH4_4g33750 Fragaria vesca
FvH4_6g19850 Fragaria vesca
Glyma.02G199700 Glycine max
Glyma.03G113100 Glycine max
Glyma.03G199900 Glycine max
Glyma.05G235000 Glycine max
Glyma.07G168100 Glycine max
Glyma.08G042500 Glycine max
Glyma.09G124800 Glycine max
Glyma.10G077600 Glycine max
Glyma.15G189500 Glycine max
Glyma.19G197500 Glycine max
Gohir.A01G147600 Gossypium hirsutum
Gohir.A01G202800 Gossypium hirsutum
Gohir.A03G117500 Gossypium hirsutum
Gohir.A04G142500 Gossypium hirsutum
Gohir.A09G137000 Gossypium hirsutum
Gohir.D01G140800 Gossypium hirsutum
Gohir.D01G192800 Gossypium hirsutum
Gohir.D02G141200 Gossypium hirsutum
Gohir.D04G185800 Gossypium hirsutum
Gohir.D11G337000 Gossypium hirsutum
Gohir.D11G337100 Gossypium hirsutum
Gohir.D11G337200 Gossypium hirsutum
Gorai.002G173100 Gossypium raimondii
Gorai.002G236600 Gossypium raimondii
Gorai.005G158400 Gossypium raimondii
Gorai.006G151000 Gossypium raimondii
Gorai.007G367000 Gossypium raimondii
Gorai.007G367100 Gossypium raimondii
Gorai.007G367200 Gossypium raimondii
Gorai.012G182100 Gossypium raimondii
GSVIVG01011671001 Vitis vinifera
GSVIVG01033925001 Vitis vinifera
GSVIVG01036063001 Vitis vinifera
HanXRQChr01g0025561 Helianthus annuus
HanXRQChr05g0130541 Helianthus annuus
HanXRQChr12g0382281 Helianthus annuus
HanXRQChr13g0398141 Helianthus annuus
HanXRQChr15g0476761 Helianthus annuus
HanXRQChr15g0494761 Helianthus annuus
HanXRQChr17g0567291 Helianthus annuus
Haze_10899 Corylus avellana
Haze_19675 Corylus avellana
Haze_26100 Corylus avellana
Hma1.2p1_0064F.1_g034890 Hydrangea macrophylla
Hma1.2p1_0089F.1_g045505 Hydrangea macrophylla
HPP92_002736 Vanilla planifolia
HPP92_009406 Vanilla planifolia
HPP92_009432 Vanilla planifolia
HPP92_028479 Vanilla planifolia
Hund18789 Selenicereus undatus
Hund18790 Selenicereus undatus
Hund20940 Selenicereus undatus
Lalb_Chr05g0222271 Lupinus albus
Lalb_Chr06g0172531 Lupinus albus
Lalb_Chr16g0387651 Lupinus albus
Lalb_Chr21g0315991 Lupinus albus
Lalb_Chr21g0316001 Lupinus albus
Lalb_Chr21g0316011 Lupinus albus
Lj1A1035G10 Lonicera japonica
Lj2A973G29 Lonicera japonica
Lj3A865G67 Lonicera japonica
Lj4g0013963 Lotus japonicus
Lj5g0008737 Lotus japonicus
Lsat_1_v5_gn_1_57321 Lactuca sativa
Lsat_1_v5_gn_3_53341 Lactuca sativa
Lsat_1_v5_gn_4_171261 Lactuca sativa
Lsat_1_v5_gn_6_35261 Lactuca sativa
Manes.08G030800 Manihot esculenta
Manes.09G049200 Manihot esculenta
Manes.15G133400 Manihot esculenta
Manes.17G083100 Manihot esculenta
Mapoly0077s0013 Marchantia polymorpha
MBI01_g45196_MAGBIO Magnolia biondii
MBI12_g40531_MAGBIO Magnolia biondii
MBI12_g47886_MAGBIO Magnolia biondii
MBI13_g40653_MAGBIO Magnolia biondii
MBI17_g10318_MAGBIO Magnolia biondii
MBI19_g35811_MAGBIO Magnolia biondii
MCO01G707 Micromonas commoda
MD03G1151600 Malus domestica
MD11G1170800 Malus domestica
MD12G1034000 Malus domestica
MD13G1029400 Malus domestica
MD14G1035400 Malus domestica
MD16G1020200 Malus domestica
Medtr1g058100 Medicago truncatula
Medtr8g105010 Medicago truncatula
MELO3C005277.2 Cucumis melo
MELO3C009513.2 Cucumis melo
MELO3C026435.2 Cucumis melo
Migut.E00469 Erythranthe guttata
Migut.L01815 Erythranthe guttata
MSTRG.10389 Avicennia marina
MSTRG.13619 Avicennia marina
MSTRG.17690 Avicennia marina
MSTRG.19294 Avicennia marina
MSTRG.2137 Avicennia marina
MSTRG.26614 Avicennia marina
MSTRG.5880 Avicennia marina
Nitab4.5_0000020g0430 Nicotiana tabacum
Nitab4.5_0000380g0180 Nicotiana tabacum
Nitab4.5_0000657g0020 Nicotiana tabacum
Nitab4.5_0000840g0030 Nicotiana tabacum
Nitab4.5_0000916g0010 Nicotiana tabacum
Nitab4.5_0000922g0020 Nicotiana tabacum
Nitab4.5_0001916g0030 Nicotiana tabacum
Nitab4.5_0002994g0010 Nicotiana tabacum
Nitab4.5_0004277g0020 Nicotiana tabacum
Nitab4.5_0008129g0020 Nicotiana tabacum
Nn1g00474 Nelumbo nucifera
Nn3g18343 Nelumbo nucifera
Nn4g24348 Nelumbo nucifera
Nn6g34772 Nelumbo nucifera
Oeu007182.1 Olea europaea
Oeu009315.1 Olea europaea
Oeu010303.1 Olea europaea
Oeu017708.1 Olea europaea
Oeu060356.2 Olea europaea
Os03g0712300 Oryza sativa ssp. japonica
Os09g0297100 Oryza sativa ssp. japonica
Os12g0605400 Oryza sativa ssp. japonica
Peaxi162Scf00224g00717 Petunia axillaris
Peaxi162Scf00337g00916 Petunia axillaris
Peaxi162Scf00419g00111 Petunia axillaris
Peaxi162Scf01662g00008 Petunia axillaris
PGR102G0935 Punica granatum
PGR142G0366 Punica granatum
PGR142G2370 Punica granatum
PGSC0003DMG400016382 Solanum tuberosum
PGSC0003DMG400028241 Solanum tuberosum
PGSC0003DMG401029471 Solanum tuberosum
Phvul.001G193800 Phaseolus vulgaris
Phvul.002G320000 Phaseolus vulgaris
Phvul.003G020400 Phaseolus vulgaris
Phvul.007G270100 Phaseolus vulgaris
Potri.006G205700 Populus trichocarpa
Potri.008G133900 Populus trichocarpa
Potri.010G107700 Populus trichocarpa
Potri.016G073100 Populus trichocarpa
Pp3c26_3910 Physcomitrium patens
Pp3c4_23750 Physcomitrium patens
Pp3c7_5550 Physcomitrium patens
PRCOL_00002271 Prasinoderma coloniale
Prupe.1G332100 Prunus persica
Prupe.7G098800 Prunus persica
Psat6g081960 Pisum sativum
Psat7g008560 Pisum sativum
PSO017G2725 Papaver somniferum
PSO170G3644 Papaver somniferum
PSO339G3987 Papaver somniferum
PSO339G4709 Papaver somniferum
PSO384G1622 Papaver somniferum
PSO478G3854 Papaver somniferum
PSO801G0734 Papaver somniferum
QL03p035128 Quercus lobata
QL07p037564 Quercus lobata
RcHm_v2.0_Chr3g0475251 Rosa chinensis
RcHm_v2.0_Chr4g0404321 Rosa chinensis
RcHm_v2.0_Chr4g0405771 Rosa chinensis
RcHm_v2.0_Chr4g0443281 Rosa chinensis
RcHm_v2.0_Chr5g0047211 Rosa chinensis
Rhsim03G0067500 Rhododendron simsii
Rhsim09G0091300 Rhododendron simsii
Sabra06G0158700 Salix brachista
Sabra08G0102400 Salix brachista
Sabra16G0076000 Salix brachista
SalBow2G2552 Salvia bowleyana
SalBow5G1668 Salvia bowleyana
SalBow5G5743 Salvia bowleyana
Sc12g0004760 Simmondsia chinensis
Sc20g0006590 Simmondsia chinensis
Sc21g0006920 Simmondsia chinensis
Sed0003012 Sechium edule
Sed0004690 Sechium edule
Sed0010129 Sechium edule
Sed0013901 Sechium edule
Sed0022711 Sechium edule
Sed0023785 Sechium edule
SEGI_21837 Sequoiadendron giganteum
SEGI_40746 Sequoiadendron giganteum
SGA_v2.0_scaffold139G35411 Striga asiatica
SGA_v2.0_scaffold184G40001 Striga asiatica
SGA_v2.0_scaffold31G12876 Striga asiatica
SGA_v2.0_scaffold35G14024 Striga asiatica
SMO196G0084 Selaginella moellendorffii
SMO236G0067 Selaginella moellendorffii
SMO351G0388 Selaginella moellendorffii
Solyc01g007860.3 Solanum lycopersicum
Solyc04g007970.3 Solanum lycopersicum
Solyc10g083120.3 Solanum lycopersicum
Sopen01g003400 Solanum pennellii
Sopen04g003110 Solanum pennellii
Sopen10g032590 Solanum pennellii
Sp1g20720 Schrenkiella parvula
Sp5g09750 Schrenkiella parvula
Sp5g25840 Schrenkiella parvula
TAR371G0075 Trochodendron aralioides
TAR629G0015 Trochodendron aralioides
TAR633G0616 Trochodendron aralioides
TAR636G1249 Trochodendron aralioides
THA.LOC104809097 Tarenaya hassleriana
THA.LOC104816614 Tarenaya hassleriana
THA.LOC104822990 Tarenaya hassleriana
THA.LOC104823500 Tarenaya hassleriana
THA.LOC104827713 Tarenaya hassleriana
Thecc.02G291300 Theobroma cacao
Thecc.05G100100 Theobroma cacao
Thhalv10008977m.g Eutrema salsugineum
Thhalv10010800m.g Eutrema salsugineum
Thhalv10019608m.g Eutrema salsugineum
TPR.G21159 Trifolium pratense
TPR.G8741 Trifolium pratense
TWI53G1502 Tripterygium wilfordii
TWI53G1632 Tripterygium wilfordii
TWI74G0051 Tripterygium wilfordii
TWI74G1500 Tripterygium wilfordii
TWI77G0182 Tripterygium wilfordii
TWI77G0265 Tripterygium wilfordii
unitig_22.g5136 Utricularia gibba
unitig_27.g25158 Utricularia gibba
unitig_578.g15818 Utricularia gibba
unitig_744.g24706 Utricularia gibba
vmacro07458 Vaccinium macrocarpon
vmacro08845 Vaccinium macrocarpon
vmacro22454 Vaccinium macrocarpon
VMungo0251G1694 Vigna mungo
VMungo0720G0529 Vigna mungo
VMungo1215G0997 Vigna mungo
VMungo1383G0248 Vigna mungo
Zm00001eb054950 Zea mays
Zm00001eb203340 Zea mays
Zm00001eb216310 Zea mays
Zm00001eb309210 Zea mays

User provided reference genes

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