Gene: AT1G70650

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G70650
  • Transcript Identifier AT1G70650.2
  • Gene Type Coding gene
  • Location Chr1 : 26638158-26641949 : positive

Gene Family Information

  • ID HOM05D001590
  • #Genes/#Species 404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G70650.2
  • uniprot F4I6V2

Descriptions

  • Description Ran BP2/NZF zinc finger-like superfamily protein
  • Computational description Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: zinc finger (Ran-binding) family protein (TAIR:AT1G55040.1); Has 972 Blast hits to 707 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 300; Fungi - 88; Plants - 413; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).
  • Computational description Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: mitochondrion, intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: MMS ZWEI homologue 2 (TAIR:AT1G70660.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902916
ISO
PLAZA Integrative Orthologypositive regulation of protein polyubiquitination AT1G70660
GO:0006301
ISO
PLAZA Integrative Orthologypostreplication repair AT1G70660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G70660

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005739
HDA
Gene Ontologymitochondrion1
GO:0031372
ISO
PLAZA Integrative OrthologyUBC13-MMS2 complex AT1G70660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR036443 Zinc finger, RanBP2-type superfamily
IPR000608 Ubiquitin-conjugating enzyme E2
IPR001876 Zinc finger, RanBP2-type
Mapman id Description
16.11.3.3.3 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (OZ)
19.2.2.1.5.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Uev1