Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34300 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis
Actinidia07498 Actinidia chinensis
Actinidia12544 Actinidia chinensis
Ah.06g184730 Amaranthus hybridus
AL3G27540 Arabidopsis lyrata
Aqoxy1G02303 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea
AT3G15150 Arabidopsis thaliana
ATR0602G252 Amborella trichopoda
Atru.chr2.2390 Acer truncatum
AUR62019482 Chenopodium quinoa
AUR62036152 Chenopodium quinoa
BcaB06g29539 Brassica carinata
BolC5t33893H Brassica oleracea
BraA05t22251Z Brassica rapa
C05p52080 Brassica napus
CAN.G162.30 Capsicum annuum
CANSAT35G0349 Cannabis sativa
CARHR090130 Cardamine hirsuta
Carub.0003s1480 Capsella rubella
Ca_03532_v3 Cicer arietinum L.
CBR_g861 Chara braunii
Cc05_g11670 Coffea canephora
CDE08G0579 Ceratophyllum demersum
Cfa020616 Carpinus fangiana
Ciclev10009269m.g Citrus clementina
CiPaw.11G166900 Carya illinoinensis
ClCG11G017750 Citrullus lanatus
Cpa.g.sc80.2 Carica papaya
CsaV3_4G033370 Cucumis sativus L.
CSS0025681 Camellia sinensis var. sinensis
CSS0029173 Camellia sinensis var. sinensis
DCAR_017121 Daucus carota
Dinv14944 Davidia involucrata
Duzib213G1006 Durio zibethinus
ECA234G0004 Erigeron canadensis
EL10Ac4g08253 Beta vulgaris
Eucgr.F01175 Eucalyptus grandis
FAN11G0360 Fragaria x ananassa
FAN16G3278 Fragaria x ananassa
FAN25G3572 Fragaria x ananassa
FvH4_3g19260 Fragaria vesca
Glyma.13G273500 Glycine max
Gohir.A01G061000 Gossypium hirsutum
Gohir.D01G047500 Gossypium hirsutum
Gorai.002G067000 Gossypium raimondii
GSVIVG01014276001 Vitis vinifera
HanXRQChr10g0302511 Helianthus annuus
Haze_09389 Corylus avellana
Haze_09393 Corylus avellana
Haze_09394 Corylus avellana
Haze_09398 Corylus avellana
Haze_09400 Corylus avellana
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla
HPP92_024567 Vanilla planifolia
Hund17607 Selenicereus undatus
Lalb_Chr25g0286221 Lupinus albus
Lj3g0026269 Lotus japonicus
Lj8A153G39 Lonicera japonica
Lsat_1_v5_gn_5_127501 Lactuca sativa
Manes.03G104900 Manihot esculenta
Mapoly0066s0041 Marchantia polymorpha
Mapoly0096s0048 Marchantia polymorpha
MBI02_g25404_MAGBIO Magnolia biondii
MBI02_g44100_MAGBIO Magnolia biondii
MD03G1235300 Malus domestica
MD11G1255800 Malus domestica
Medtr2g078640 Medicago truncatula
MELO3C025617.2 Cucumis melo
Migut.M00775 Erythranthe guttata
MSTRG.15242 Avicennia marina
Nitab4.5_0000246g0010 Nicotiana tabacum
Nitab4.5_0002019g0020 Nicotiana tabacum
Nn1g06395 Nelumbo nucifera
Nn5g27383 Nelumbo nucifera
Oeu005397.1 Olea europaea
Os05g0563500 Oryza sativa ssp. japonica
Peaxi162Scf00069g01837 Petunia axillaris
PGR083G2053 Punica granatum
PGSC0003DMG401012439 Solanum tuberosum
Phvul.005G029100 Phaseolus vulgaris
Phvul.005G075200 Phaseolus vulgaris
Potri.011G141200 Populus trichocarpa
Pp3c20_12000 Physcomitrium patens
Pp3c22_18560 Physcomitrium patens
Pp3c23_10880 Physcomitrium patens
Pp3c23_16570 Physcomitrium patens
PRCOL_00000682 Prasinoderma coloniale
Prupe.4G174000 Prunus persica
Psat0s1402g0080 Pisum sativum
PSO541G4753 Papaver somniferum
PSO675G8981 Papaver somniferum
QL08p023698 Quercus lobata
QL08p023707 Quercus lobata
RcHm_v2.0_Chr5g0032331 Rosa chinensis
Rhsim06G0203200 Rhododendron simsii
Sabra11G0126800 Salix brachista
Sc16g0007290 Simmondsia chinensis
Sed0026268 Sechium edule
SGA_v2.0_scaffold34G13795 Striga asiatica
SHI39306 Sapria himalayana
SHI39545 Sapria himalayana
SMO143G0268 Selaginella moellendorffii
SMO265G0056 Selaginella moellendorffii
Solyc07g062780.3 Solanum lycopersicum
Sopen07g031000 Solanum pennellii
Sp3g13360 Schrenkiella parvula
TAR627G0129 Trochodendron aralioides
THA.LOC104818093 Tarenaya hassleriana
Thecc.02G169600 Theobroma cacao
Thecc.07G098700 Theobroma cacao
Thhalv10021394m.g Eutrema salsugineum
TPR.G7947 Trifolium pratense
TWI38G0530 Tripterygium wilfordii
unitig_747.g21579 Utricularia gibba
vmacro11896 Vaccinium macrocarpon
VMungo1080G0633 Vigna mungo
Zm00001eb295840 Zea mays

User provided reference genes

Program Settings