Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p57680 Brassica napus
Aa31LG2G12400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis
Ah.14g087400 Amaranthus hybridus
AL4G11740 Arabidopsis lyrata
Aqoxy1G04265 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea
AT2G22260 Arabidopsis thaliana
ATR0751G145 Amborella trichopoda
Atru.chr1.1073 Acer truncatum
AUR62012856 Chenopodium quinoa
AUR62021809 Chenopodium quinoa
BcaB08g35054 Brassica carinata
BcaC07g41084 Brassica carinata
BcaC07g41085 Brassica carinata
BolC8t51654H Brassica oleracea
BraA09t41161Z Brassica rapa
C08p40880 Brassica napus
CAN.G1263.6 Capsicum annuum
CARHR113490 Cardamine hirsuta
Carub.0004s0140 Capsella rubella
Ca_00765_v3 Cicer arietinum L.
CBR_g3891 Chara braunii
Cc09_g00290 Coffea canephora
Cfa000032 Carpinus fangiana
Cfa021867 Carpinus fangiana
Cfa024106 Carpinus fangiana
Cfa024972 Carpinus fangiana
Ciclev10016440m.g Citrus clementina
CiPaw.10G082200 Carya illinoinensis
ClCG01G021210 Citrullus lanatus
Cpa.g.sc27.224 Carica papaya
Cre03.g146087 Chlamydomonas reinhardtii
CsaV3_6G048230 Cucumis sativus L.
CSS0008489 Camellia sinensis var. sinensis
CSS0047745 Camellia sinensis var. sinensis
DCAR_002245 Daucus carota
Dinv15335 Davidia involucrata
Duzib160G0007 Durio zibethinus
ECA248G0604 Erigeron canadensis
EL10Ac8g20269 Beta vulgaris
Eucgr.E03848 Eucalyptus grandis
Eucgr.E03850 Eucalyptus grandis
Eucgr.L00150 Eucalyptus grandis
FvH4_3g00300 Fragaria vesca
Glyma.09G014800 Glycine max
Glyma.15G120500 Glycine max
Gohir.A10G007900 Gossypium hirsutum
Gohir.D10G007800 Gossypium hirsutum
Gorai.011G008500 Gossypium raimondii
HanXRQChr05g0129031 Helianthus annuus
Haze_07021 Corylus avellana
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla
HPP92_018202 Vanilla planifolia
Hund08692 Selenicereus undatus
Lalb_Chr20g0119561 Lupinus albus
Lj1C1247T0 Lonicera japonica
Lj6g0027493 Lotus japonicus
Lsat_1_v5_gn_7_12961 Lactuca sativa
Manes.09G083300 Manihot esculenta
MCO03G167 Micromonas commoda
MD10G1339500 Malus domestica
Medtr2g027110 Medicago truncatula
MELO3C008006.2 Cucumis melo
Migut.M01446 Erythranthe guttata
MSTRG.7126 Avicennia marina
Nitab4.5_0000147g0330 Nicotiana tabacum
Nitab4.5_0006294g0080 Nicotiana tabacum
Nn1g07524 Nelumbo nucifera
Oeu025969.1 Olea europaea
Os06g0286310 Oryza sativa ssp. japonica
Peaxi162Scf00811g00222 Petunia axillaris
Peaxi162Scf00827g00057 Petunia axillaris
PGR004G0828 Punica granatum
PGR042G3561 Punica granatum
PGSC0003DMG400015008 Solanum tuberosum
Phvul.006G137400 Phaseolus vulgaris
Phvul.006G137611 Phaseolus vulgaris
Potri.006G004500 Populus trichocarpa
Pp3c2_11520 Physcomitrium patens
PRCOL_00000148 Prasinoderma coloniale
PRCOL_00002494 Prasinoderma coloniale
PRCOL_00002998 Prasinoderma coloniale
PRCOL_00003886 Prasinoderma coloniale
Prupe.4G003400 Prunus persica
Psat1g141560 Pisum sativum
Psat1g172360 Pisum sativum
Psat2g019160 Pisum sativum
PSO210G0886 Papaver somniferum
PSO210G1263 Papaver somniferum
QL05p067740 Quercus lobata
RcHm_v2.0_Chr5g0000451 Rosa chinensis
Rhsim13G0140300 Rhododendron simsii
Sabra06G0003800 Salix brachista
SalBow8G1397 Salvia bowleyana
SalBow8G2449 Salvia bowleyana
Sc17g0008010 Simmondsia chinensis
Sed0010073 Sechium edule
Sed0011139 Sechium edule
SEGI_23146 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03692 Striga asiatica
SHI31451 Sapria himalayana
SHI31456 Sapria himalayana
Solyc04g015080.4 Solanum lycopersicum
Solyc12g056880.2 Solanum lycopersicum
Sopen04g007100 Solanum pennellii
Sp4g01310 Schrenkiella parvula
SpUn1059_0010 Schrenkiella parvula
TAR629G1611 Trochodendron aralioides
THA.LOC104815473 Tarenaya hassleriana
Thecc.06G241400 Theobroma cacao
TPR.G17557 Trifolium pratense
TWI38G1730 Tripterygium wilfordii
unitig_37.g12177 Utricularia gibba
vmacro03605 Vaccinium macrocarpon
VMungo0540G0952 Vigna mungo
VMungo0540G1474 Vigna mungo
Zm00001eb380830 Zea mays

User provided reference genes

Program Settings