Gene: Carub.0004s0140

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s0140
  • Transcript Identifier Carub.0004s0140.1
  • Gene Type Coding gene
  • Location scaffold_4 : 516488-517973 : positive

Gene Family Information

  • ID HOM05D006551
  • #Genes/#Species 122/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s0140.v1.1
  • pacid 39237506
  • synonym Carubv10024523m.g

Descriptions

  • Description PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT2G22260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035514
ISO
PLAZA Integrative OrthologyDNA demethylase activity AT2G22260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032852 DNA oxidative demethylase ALKBH2
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR025131 Domain of unknown function DUF4057
Mapman id Description
35.1 not assigned.annotated