Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p08200 Brassica napus
Aa31LG1G18710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis
Actinidia26749 Actinidia chinensis
Actinidia36787 Actinidia chinensis
Actinidia37252 Actinidia chinensis
Ah.15g095320 Amaranthus hybridus
AL8G40370 Arabidopsis lyrata
Aqoxy5G03584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea
AT5G63290 Arabidopsis thaliana
ATR0733G153 Amborella trichopoda
Atru.chr9.1008 Acer truncatum
AUR62001276 Chenopodium quinoa
AUR62025730 Chenopodium quinoa
BcaB01g05367 Brassica carinata
BcaB04g19911 Brassica carinata
BcaNung06574 Brassica carinata
BolC9t53839H Brassica oleracea
BraA09t36471Z Brassica rapa
C09p09260 Brassica napus
CAN.G352.10 Capsicum annuum
CAN.G352.8 Capsicum annuum
CAN.G352.9 Capsicum annuum
CANSAT80G2173 Cannabis sativa
CARHR277150 Cardamine hirsuta
CARHR277160 Cardamine hirsuta
Carub.0008s2404 Capsella rubella
Ca_16091_v3 Cicer arietinum L.
CBR_g58805 Chara braunii
Cc04_g10340 Coffea canephora
CDE04G0939 Ceratophyllum demersum
Cfa009975 Carpinus fangiana
Cfa010451 Carpinus fangiana
Ciclev10020014m.g Citrus clementina
CiPaw.11G012100 Carya illinoinensis
ClCG06G017630 Citrullus lanatus
COL.COLO4_09265 Corchorus olitorius
Cre03.g171461 Chlamydomonas reinhardtii
CsaV3_1G000810 Cucumis sativus L.
CSS0033277 Camellia sinensis var. sinensis
CSS0036636 Camellia sinensis var. sinensis
Dinv11106 Davidia involucrata
Duzib068G0092 Durio zibethinus
ECA246G2708 Erigeron canadensis
EL10Ac7g18072 Beta vulgaris
FvH4_5g07331 Fragaria vesca
FvH4_5g07400 Fragaria vesca
FvH4_5g07462 Fragaria vesca
Glyma.04G192800 Glycine max
Glyma.06G173067 Glycine max
Glyma.06G173133 Glycine max
Gohir.A09G244900 Gossypium hirsutum
Gohir.D09G245800 Gossypium hirsutum
Gorai.006G270300 Gossypium raimondii
GSVIVG01007545001 Vitis vinifera
HanXRQChr05g0154751 Helianthus annuus
Haze_07303 Corylus avellana
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla
Hund18538 Selenicereus undatus
Lalb_Chr08g0236931 Lupinus albus
Lj1g0002208 Lotus japonicus
Lj5A100T59 Lonicera japonica
Lsat_1_v5_gn_4_53181 Lactuca sativa
Lsat_1_v5_gn_5_13221 Lactuca sativa
Manes.06G115100 Manihot esculenta
Mapoly0005s0190 Marchantia polymorpha
MBI06_g38704_MAGBIO Magnolia biondii
MCO01G029 Micromonas commoda
MD06G1152300 Malus domestica
MD06G1154400 Malus domestica
MD06G1156000 Malus domestica
MD06G1157100 Malus domestica
MD06G1157200 Malus domestica
MD14G1163800 Malus domestica
Medtr3g075110 Medicago truncatula
MELO3C026233.2 Cucumis melo
Migut.I00467 Erythranthe guttata
MSTRG.11294 Avicennia marina
Nitab4.5_0003282g0090 Nicotiana tabacum
Nitab4.5_0004750g0040 Nicotiana tabacum
Nn3g16581 Nelumbo nucifera
Oeu037566.1 Olea europaea
Oeu045471.1 Olea europaea
Oeu045480.1 Olea europaea
Os12g0270100 Oryza sativa ssp. japonica
Peaxi162Scf00089g00625 Petunia axillaris
PGR044G1877 Punica granatum
PGSC0003DMG400015239 Solanum tuberosum
Phvul.009G169000 Phaseolus vulgaris
Potri.012G092900 Populus trichocarpa
Pp3c13_23570 Physcomitrium patens
PRCOL_00001606 Prasinoderma coloniale
Prupe.5G157200 Prunus persica
Psat5g141840 Pisum sativum
PSO729G0022 Papaver somniferum
QL10p005246 Quercus lobata
RcHm_v2.0_Chr7g0191211 Rosa chinensis
Rhsim12G0172000 Rhododendron simsii
Sabra12G0067500 Salix brachista
Sc04g0000970 Simmondsia chinensis
Sed0023544 Sechium edule
SEGI_06622 Sequoiadendron giganteum
SEGI_28812 Sequoiadendron giganteum
SGA_v2.0_scaffold338G49246 Striga asiatica
SMO364G0036 Selaginella moellendorffii
Solyc03g111360.3 Solanum lycopersicum
Sopen03g030490 Solanum pennellii
Sp2g26410 Schrenkiella parvula
TAR374G1424 Trochodendron aralioides
THA.LOC104818195 Tarenaya hassleriana
Thecc.03G122600 Theobroma cacao
Thhalv10004112m.g Eutrema salsugineum
TPR.G24245 Trifolium pratense
TWI14G0972 Tripterygium wilfordii
unitig_22.g5878 Utricularia gibba
vmacro16659 Vaccinium macrocarpon
vmacro16708 Vaccinium macrocarpon
vmacro23154 Vaccinium macrocarpon
VMungo1309G1872 Vigna mungo
Zm00001eb001600 Zea mays

User provided reference genes

Program Settings