Gene: Pp3c13_23570

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c13_23570
  • Transcript Identifier Pp3c13_23570V3.1
  • Gene Type Coding gene
  • Location Chr13 : 16512321-16513907 : negative

Gene Family Information

  • ID HOM05D006543
  • #Genes/#Species 122/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c13_23570V3.1
  • pacid 32930647
  • alias Phypa_121859
  • alias Phpat.013G079900
  • alias Pp1s37_239V6
  • uniprot A0A2K1JN05

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006779
IBA
IEA
GOA Databaseporphyrin-containing compound biosynthetic process
GO:0006779
IEA
InterProporphyrin-containing compound biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004109
IEA
GOA Databasecoproporphyrinogen oxidase activity
GO:0004109
IEA
InterProcoproporphyrinogen oxidase activity
GO:0051539
IBA
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004559 Heme chaperone HemW-like
IPR023404 Radical SAM, alpha/beta horseshoe
IPR010723 HemN, C-terminal
IPR034505 Anaerobic coproporphyrinogen-III oxidase
IPR006638 Elp3/MiaB/NifB
IPR007197 Radical SAM
Mapman id Description
7.12.4.2.2 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.oxygen-independent coproporphyrinogen III oxidase (HemN)