Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17690 Brassica napus
A08p28900 Brassica napus
A08p28910 Brassica napus
Aa31LG7G5580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis
Actinidia15213 Actinidia chinensis
Actinidia21278 Actinidia chinensis
Actinidia21279 Actinidia chinensis
Ah.10g032560 Amaranthus hybridus
AL1G34740 Arabidopsis lyrata
Aqoxy219s001 Aquilegia oxysepala
Aqoxy5G02393 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea
AT1G21600 Arabidopsis thaliana
ATR0568G086 Amborella trichopoda
Atru.chr13.1568 Acer truncatum
AUR62007717 Chenopodium quinoa
AUR62013426 Chenopodium quinoa
BcaB07g32155 Brassica carinata
BcaC05g26077 Brassica carinata
BolC5t30757H Brassica oleracea
BolC5t30909H Brassica oleracea
BolC8t49731H Brassica oleracea
BraA06t24861Z Brassica rapa
BraA08t34821Z Brassica rapa
C05p20590 Brassica napus
C08p20930 Brassica napus
CAN.G288.5 Capsicum annuum
CANSAT25G1301 Cannabis sativa
CARHR021960 Cardamine hirsuta
Carub.0001s2103 Capsella rubella
Ca_16607_v3 Cicer arietinum L.
CBR_g40143 Chara braunii
Cc10_g13760 Coffea canephora
CDE04G0676 Ceratophyllum demersum
CDE06G0572 Ceratophyllum demersum
Cfa018129 Carpinus fangiana
Ciclev10001886m.g Citrus clementina
CiPaw.16G022700 Carya illinoinensis
ClCG11G015980 Citrullus lanatus
COL.COLO4_06961 Corchorus olitorius
Cpa.g.sc26.317 Carica papaya
CsaV3_4G028270 Cucumis sativus L.
CsaV3_5G018920 Cucumis sativus L.
CsaV3_5G018930 Cucumis sativus L.
CsaV3_5G019980 Cucumis sativus L.
CsaV3_UNG111870 Cucumis sativus L.
CsaV3_UNG115880 Cucumis sativus L.
CsaV3_UNG224650 Cucumis sativus L.
CSS0036755 Camellia sinensis var. sinensis
DCAR_003587 Daucus carota
Dinv14691 Davidia involucrata
Duzib093G1884 Durio zibethinus
ECA236G3303 Erigeron canadensis
EL10Ac1g01346 Beta vulgaris
Eucgr.A00239 Eucalyptus grandis
FAN15G0171 Fragaria x ananassa
FAN20G2488 Fragaria x ananassa
FAN24G2159 Fragaria x ananassa
FAN27G1901 Fragaria x ananassa
FvH4_2g27850 Fragaria vesca
Glyma.04G087000 Glycine max
Glyma.06G117500 Glycine max
Gohir.A02G071000 Gossypium hirsutum
Gohir.D02G078200 Gossypium hirsutum
Gorai.005G087700 Gossypium raimondii
GSVIVG01008807001 Vitis vinifera
HanXRQChr02g0045521 Helianthus annuus
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla
HPP92_009911 Vanilla planifolia
Hund17341 Selenicereus undatus
Lalb_Chr08g0241101 Lupinus albus
Lj1g0002290 Lotus japonicus
Lj4A682G50 Lonicera japonica
Lsat_1_v5_gn_1_7780 Lactuca sativa
Manes.02G168400 Manihot esculenta
Mapoly0008s0219 Marchantia polymorpha
MBI03_g28486_MAGBIO Magnolia biondii
MBI03_g39652_MAGBIO Magnolia biondii
MBI03_g48069_MAGBIO Magnolia biondii
MD08G1159400 Malus domestica
Medtr3g088605 Medicago truncatula
MELO3C010512.2 Cucumis melo
Migut.N03260 Erythranthe guttata
MSTRG.22398 Avicennia marina
Nitab4.5_0001168g0170 Nicotiana tabacum
Nitab4.5_0003978g0010 Nicotiana tabacum
Nn1g08961 Nelumbo nucifera
Oeu047179.2 Olea europaea
Os11g0110100 Oryza sativa ssp. japonica
Os12g0110400 Oryza sativa ssp. japonica
Peaxi162Scf00066g00222 Petunia axillaris
PGR083G0137 Punica granatum
PGSC0003DMG400028061 Solanum tuberosum
Phvul.009G129900 Phaseolus vulgaris
Potri.002G078900 Populus trichocarpa
Pp3c1_1000 Physcomitrium patens
Prupe.1G489500 Prunus persica
Psat5g084760 Pisum sativum
PSO017G3385 Papaver somniferum
PSO170G2303 Papaver somniferum
QL09p032485 Quercus lobata
RcHm_v2.0_Chr6g0296711 Rosa chinensis
Rhsim06G0091400 Rhododendron simsii
Sabra02G0061800 Salix brachista
SalBow2G2951 Salvia bowleyana
Sc26g0002930 Simmondsia chinensis
Sed0021255 Sechium edule
SEGI_15088 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11139 Striga asiatica
SMO146G0302 Selaginella moellendorffii
Solyc04g057870.3 Solanum lycopersicum
Sopen04g025710 Solanum pennellii
Sp1g19130 Schrenkiella parvula
TAR628G0457 Trochodendron aralioides
THA.LOC104814021 Tarenaya hassleriana
Thecc.08G133100 Theobroma cacao
Thhalv10007813m.g Eutrema salsugineum
TPR.G28811 Trifolium pratense
unitig_52.g17545 Utricularia gibba
vmacro20822 Vaccinium macrocarpon
VMungo1309G0712 Vigna mungo
Zm00001eb195160 Zea mays

User provided reference genes

Program Settings