Gene: Pp3c1_1000

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_1000
  • Transcript Identifier Pp3c1_1000V3.1
  • Gene Type Coding gene
  • Location Chr01 : 687546-690226 : negative

Gene Family Information

  • ID HOM05D006408
  • #Genes/#Species 124/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_1000V3.1
  • pacid 32969750
  • alias Pp1s200_101V6
  • alias Phypa_143240
  • alias Phpat.001G004900
  • uniprot A0A2K1L6H0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042793
IEA
GOA Databaseplastid transcription
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G21600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000427
IEA
GOA Databaseplastid-encoded plastid RNA polymerase complex
GO:0000427
IEA
InterProplastid-encoded plastid RNA polymerase complex
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0009508
IEA
GOA Databaseplastid chromosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G21600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044710 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6
Mapman id Description
15.6.1.2.2.8 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP8/TAC6