Gene: AT1G21600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G21600
  • Transcript Identifier AT1G21600.2
  • Gene Type Coding gene
  • Location Chr1 : 7571514-7573782 : negative

Gene Family Information

  • ID HOM05D006408
  • #Genes/#Species 124/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G21600.2
  • symbol PTAC6
  • uniprot Q9XI19

Descriptions

  • Description plastid transcriptionally active 6
  • Computational description plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042793
IDA
GOA Databaseplastid transcription
GO:0042793
IMP
Gene Ontologyplastid transcription1
GO:0045893
IMP
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0006355
IDA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
IC
Gene Ontologychloroplast1
GO:0000427
IEA
GOA Databaseplastid-encoded plastid RNA polymerase complex
GO:0000427
IDA
Gene Ontologyplastid-encoded plastid RNA polymerase complex1
GO:0000427
IEA
InterProplastid-encoded plastid RNA polymerase complex
GO:0042644
IDA
GOA Databasechloroplast nucleoid
GO:0042644
HDA
Gene Ontologychloroplast nucleoid1
GO:0009508
IDA
GOA Databaseplastid chromosome
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044710 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6
Mapman id Description
15.6.1.2.2.8 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP8/TAC6