Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00200 Brassica napus
Aa31LG1G21560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis
Actinidia06221 Actinidia chinensis
Actinidia07968 Actinidia chinensis
Ah.08g212940 Amaranthus hybridus
AL6G20270 Arabidopsis lyrata
Aqoxy3G04239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea
AT5G09860 Arabidopsis thaliana
ATR0618G428 Amborella trichopoda
Atru.chr12.1309 Acer truncatum
AUR62033702 Chenopodium quinoa
AUR62036785 Chenopodium quinoa
BcaB05g21524 Brassica carinata
BcaC03g13281 Brassica carinata
BolC2t06374H Brassica oleracea
BraA02t05004Z Brassica rapa
C02p04120 Brassica napus
CAN.G134.27 Capsicum annuum
CANSAT01G0073 Cannabis sativa
CANSAT01G1515 Cannabis sativa
CANSAT56G0825 Cannabis sativa
CARHR203490 Cardamine hirsuta
Carub.0006s0829 Capsella rubella
CBR_g45491 Chara braunii
Cc00_g06110 Coffea canephora
Cc00_g06120 Coffea canephora
CDE05G0354 Ceratophyllum demersum
CDE05G1199 Ceratophyllum demersum
CDE05G3545 Ceratophyllum demersum
Cfa010950 Carpinus fangiana
Ciclev10000631m.g Citrus clementina
CiPaw.06G056300 Carya illinoinensis
ClCG05G014210 Citrullus lanatus
ClCG05G014240 Citrullus lanatus
COL.COLO4_06638 Corchorus olitorius
COL.COLO4_19610 Corchorus olitorius
Cpa.g.sc51.83 Carica papaya
Cre16.g695300 Chlamydomonas reinhardtii
CsaV3_5G023770 Cucumis sativus L.
CSS0009585 Camellia sinensis var. sinensis
DCAR_022366 Daucus carota
Dinv11233 Davidia involucrata
Duzib106G1787 Durio zibethinus
ECA233G5267 Erigeron canadensis
EL10Ac7g17197 Beta vulgaris
Eucgr.E03954 Eucalyptus grandis
FAN03G2625 Fragaria x ananassa
FAN06G2813 Fragaria x ananassa
FAN10G4343 Fragaria x ananassa
FvH4_7g03810 Fragaria vesca
Glyma.04G133800 Glycine max
Gohir.A05G399300 Gossypium hirsutum
Gohir.D04G016600 Gossypium hirsutum
Gorai.012G019300 Gossypium raimondii
GSVIVG01036611001 Vitis vinifera
GSVIVG01036616001 Vitis vinifera
GSVIVG01036631001 Vitis vinifera
HanXRQChr02g0048711 Helianthus annuus
Haze_02994 Corylus avellana
HPP92_005051 Vanilla planifolia
HPP92_005075 Vanilla planifolia
Hund12548 Selenicereus undatus
Hund24435 Selenicereus undatus
Lalb_Chr20g0109671 Lupinus albus
Lalb_Chr20g0109811 Lupinus albus
Lj3g0023685 Lotus japonicus
Lj9A658T58 Lonicera japonica
Lj9C658T10 Lonicera japonica
Lj9C658T8 Lonicera japonica
Lsat_1_v5_gn_6_13001 Lactuca sativa
Manes.04G156400 Manihot esculenta
Mapoly0007s0076 Marchantia polymorpha
MBI03_g05118_MAGBIO Magnolia biondii
MD14G1003800 Malus domestica
MELO3C022813.2 Cucumis melo
Migut.B01193 Erythranthe guttata
MSTRG.16978 Avicennia marina
Nitab4.5_0002838g0090 Nicotiana tabacum
Nitab4.5_0004168g0080 Nicotiana tabacum
Nn3g19142 Nelumbo nucifera
Nn8g38623 Nelumbo nucifera
Oeu014625.1 Olea europaea
Oeu014626.1 Olea europaea
Os03g0110400 Oryza sativa ssp. japonica
Peaxi162Scf00220g00411 Petunia axillaris
PGR031G3177 Punica granatum
Phvul.005G004500 Phaseolus vulgaris
Potri.001G031700 Populus trichocarpa
Potri.003G194000 Populus trichocarpa
Pp3c2_4660 Physcomitrium patens
PRCOL_00001172 Prasinoderma coloniale
Prupe.7G006200 Prunus persica
Psat5g221960 Pisum sativum
PSO063G0799 Papaver somniferum
PSO782G1399 Papaver somniferum
QL04p021235 Quercus lobata
QL04p021435 Quercus lobata
QL07p029279 Quercus lobata
RcHm_v2.0_Chr1g0327151 Rosa chinensis
Rhsim07G0069200 Rhododendron simsii
Sabra01G0022800 Salix brachista
SalBow5G1256 Salvia bowleyana
Sc17g0003940 Simmondsia chinensis
Sed0017067 Sechium edule
Sed0024249 Sechium edule
SEGI_05467 Sequoiadendron giganteum
SEGI_24206 Sequoiadendron giganteum
SEGI_32708 Sequoiadendron giganteum
SGA_v2.0_scaffold342G49409 Striga asiatica
SMO134G0202 Selaginella moellendorffii
Solyc01g096600.4 Solanum lycopersicum
Sopen01g040330 Solanum pennellii
Sp6g33550 Schrenkiella parvula
TAR625G0603 Trochodendron aralioides
TAR625G1023 Trochodendron aralioides
THA.LOC104826748 Tarenaya hassleriana
Thecc.10G142600 Theobroma cacao
Thhalv10013059m.g Eutrema salsugineum
TPR.G1403 Trifolium pratense
TPR.G7074 Trifolium pratense
unitig_26.g9755 Utricularia gibba
vmacro07096 Vaccinium macrocarpon
vmacro13769 Vaccinium macrocarpon
VMungo1080G0231 Vigna mungo
Zm00001eb000780 Zea mays

User provided reference genes

Program Settings