Gene: Thecc.10G142600

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.10G142600
  • Transcript Identifier Thecc.10G142600.2
  • Gene Type Coding gene
  • Location Chromosome_10 : 19565677-19574152 : positive

Gene Family Information

  • ID HOM05D006110
  • #Genes/#Species 129/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.10G142600.v2.1
  • pacid 42024633
  • ancestorIdentifier Thecc1EG044779.CGDv1.1
  • ancestorIdentifier Thecc1EG044779t3.CGDv1.1

Descriptions

  • Description Nuclear matrix protein-related
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
ISO
PLAZA Integrative OrthologymRNA export from nucleus AT5G09860
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT5G09860
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT5G09860
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G09860
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G09860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09860
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT5G09860
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G09860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021861 THO complex, subunit THOC1
Mapman id Description
16.10.1.1.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC1/HPR1