Gene: BcaB05g21524
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaB05g21524
- Transcript Identifier BcaB05g21524
- Gene Type Coding gene
- Location ChrB05 : 471555-475403 : negative
Gene Family Information
- ID HOM05D006110
- #Genes/#Species 129/93
- Phylogenetic origin
- ID ORTHO05D007774
- #Genes/#Species 127/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006406 | ISO | PLAZA Integrative Orthology | mRNA export from nucleus | AT5G09860 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | AT5G09860 |
| GO:0009873 | ISO | PLAZA Integrative Orthology | ethylene-activated signaling pathway | AT5G09860 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT5G09860 |
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT5G09860 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G09860 |
| GO:0000347 | ISO | PLAZA Integrative Orthology | THO complex | AT5G09860 |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT5G09860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR021861 | THO complex, subunit THOC1 |
| Mapman id | Description |
|---|---|
| 16.10.1.1.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC1/HPR1 |