Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p35440 Brassica napus
A06p00460 Brassica napus
Aa31LG10G1230 Aethionema arabicum
Aa31LG8G1170 Aethionema arabicum
Aa31sc1971G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.485 Anthoceros agrestis
Actinidia26028 Actinidia chinensis
Ah.08g216780 Amaranthus hybridus
AL1G62920 Arabidopsis lyrata
AL3G26170 Arabidopsis lyrata
Aqoxy7G01092 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G5XP6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7AU8E Arachis hypogaea
AT1G54210 Arabidopsis thaliana
AT3G13970 Arabidopsis thaliana
ATR0598G320 Amborella trichopoda
Atru.chr1.3943 Acer truncatum
AUR62009882 Chenopodium quinoa
BcaB06g25414 Brassica carinata
BcaB07g33245 Brassica carinata
BcaB07g33246 Brassica carinata
BcaC05g29136 Brassica carinata
BcaC08g43600 Brassica carinata
BolC5t34043H Brassica oleracea
BolC6t36071H Brassica oleracea
BraA05t22354Z Brassica rapa
BraA06t23260Z Brassica rapa
C05p53730 Brassica napus
C06p09980 Brassica napus
CAN.G1368.2 Capsicum annuum
CANSAT25G1718 Cannabis sativa
CANSAT64G0122 Cannabis sativa
CANSAT64G2602 Cannabis sativa
CARHR044580 Cardamine hirsuta
CARHR088790 Cardamine hirsuta
Carub.0001s4344 Capsella rubella
Carub.0003s1355 Capsella rubella
Cc00_g21000 Coffea canephora
CDE05G1235 Ceratophyllum demersum
CDE11G1182 Ceratophyllum demersum
Ciclev10026605m.g Citrus clementina
CiPaw.01G218900 Carya illinoinensis
CiPaw.02G136000 Carya illinoinensis
ClCG07G014030 Citrullus lanatus
COL.COLO4_30761 Corchorus olitorius
Cre12.g557000 Chlamydomonas reinhardtii
CsaV3_3G043520 Cucumis sativus L.
CSS0011852 Camellia sinensis var. sinensis
CSS0028385 Camellia sinensis var. sinensis
DCAR_022696 Daucus carota
Dinv37869 Davidia involucrata
Duzib192G0164 Durio zibethinus
Duzib235G0120 Durio zibethinus
ECA232G1087 Erigeron canadensis
EL10Ac7g16407 Beta vulgaris
Eucgr.F03177 Eucalyptus grandis
FAN02G4125 Fragaria x ananassa
FAN05G2137 Fragaria x ananassa
FAN09G3570 Fragaria x ananassa
FAN14G4463 Fragaria x ananassa
FAN20G2981 Fragaria x ananassa
FAN24G1797 Fragaria x ananassa
FvH4_6g34660 Fragaria vesca
Glyma.07G038100 Glycine max
Glyma.16G007300 Glycine max
Gohir.A05G405800 Gossypium hirsutum
Gohir.D04G009800 Gossypium hirsutum
Gorai.012G011600 Gossypium raimondii
GSVIVG01016766001 Vitis vinifera
Haze_16030 Corylus avellana
Hma1.2p1_0291F.1_g115130 Hydrangea macrophylla
Hma1.2p1_0496F.1_g166240 Hydrangea macrophylla
HPP92_019155 Vanilla planifolia
Hund05739 Selenicereus undatus
Lalb_Chr01g0013591 Lupinus albus
Lj3g0010947 Lotus japonicus
Lsat_1_v5_gn_4_92920 Lactuca sativa
Manes.04G144301 Manihot esculenta
Manes.11G020500 Manihot esculenta
Mapoly0025s0134 Marchantia polymorpha
MCO16G375 Micromonas commoda
MD09G1183900 Malus domestica
Medtr8g020500 Medicago truncatula
MELO3C025809.2 Cucumis melo
Migut.D00939 Erythranthe guttata
Nitab4.5_0000189g0210 Nicotiana tabacum
Nitab4.5_0001199g0100 Nicotiana tabacum
Nn4g24846 Nelumbo nucifera
Oeu015484.1 Olea europaea
Os06g0205000 Oryza sativa ssp. japonica
Peaxi162Scf00177g00511 Petunia axillaris
PGSC0003DMG400011604 Solanum tuberosum
Phvul.010G130300 Phaseolus vulgaris
Potri.001G169700 Populus trichocarpa
Potri.003G064300 Populus trichocarpa
Pp3c4_29920 Physcomitrium patens
PRCOL_00003774 Prasinoderma coloniale
Prupe.3G042200 Prunus persica
Psat4g182400 Pisum sativum
PSO063G4040 Papaver somniferum
PSO421G0038 Papaver somniferum
QL05p007703 Quercus lobata
RcHm_v2.0_Chr2g0145211 Rosa chinensis
RcHm_v2.0_Chr3g0490611 Rosa chinensis
RcHm_v2.0_Chr5g0040601 Rosa chinensis
RcHm_v2.0_Chr5g0053491 Rosa chinensis
Rhsim08G0238900 Rhododendron simsii
Sabra03G0038000 Salix brachista
SalBow6G4082 Salvia bowleyana
SalBow6G4389 Salvia bowleyana
SalBow6G7202 Salvia bowleyana
Sc15g0000510 Simmondsia chinensis
Sed0008411 Sechium edule
Sed0025034 Sechium edule
SGA_v2.0_scaffold4G02063 Striga asiatica
SMO364G0450 Selaginella moellendorffii
Solyc12g049310.2 Solanum lycopersicum
Sopen12g023790 Solanum pennellii
Sp3g12220 Schrenkiella parvula
TAR636G2213 Trochodendron aralioides
THA.LOC104822655 Tarenaya hassleriana
Thecc.06G119600 Theobroma cacao
Thhalv10011896m.g Eutrema salsugineum
Thhalv10021863m.g Eutrema salsugineum
TPR.G32491 Trifolium pratense
TWI75G1673 Tripterygium wilfordii
TWI79G1574 Tripterygium wilfordii
vmacro15032 Vaccinium macrocarpon
VMungo0331G1077 Vigna mungo
Zm00001eb256700 Zea mays

User provided reference genes

Program Settings