Gene: Sopen12g023790
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen12g023790
- Transcript Identifier Sopen12g023790.1
- Gene Type Coding gene
- Location Spenn-ch12 : 60496352-60502830 : positive
Gene Family Information
- ID HOM05D006077
- #Genes/#Species 130/88
- Phylogenetic origin
- ID ORTHO05D007499
- #Genes/#Species 130/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen12g023790.1
Descriptions
- Description AUTOPHAGY 12 A (ATG12A) | INVOLVED IN: autophagy, protein ubiquitination involved in ubiquitin-dependent protein catabolic process | LOCATED IN: cytoplasm | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Autophagy-related protein 12 | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein ., Putative autophagy-related protein 12 - Oryza sativa (Rice)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000045 | IEA | InterPro | autophagosome assembly | |
| GO:0006914 | ISO | PLAZA Integrative Orthology | autophagy | AT3G13970 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G13970 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.3.3.3.1 | Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.ubiquitin-fold protein (ATG12) |