Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04100 Brassica napus
A10p22110 Brassica napus
Aa31LG11G12390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis
Actinidia17164 Actinidia chinensis
Actinidia40416 Actinidia chinensis
Actinidia40417 Actinidia chinensis
Ah.05g177670 Amaranthus hybridus
AL6G28370 Arabidopsis lyrata
Aqoxy3G04116 Aquilegia oxysepala
Aqoxy531s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea
AT5G17290 Arabidopsis thaliana
ATR0807G042 Amborella trichopoda
Atru.chr1.2153 Acer truncatum
AUR62004772 Chenopodium quinoa
AUR62037479 Chenopodium quinoa
AUR62037480 Chenopodium quinoa
BcaB08g36791 Brassica carinata
BcaC03g18547 Brassica carinata
BcaC04g18810 Brassica carinata
BcaNung00408 Brassica carinata
BolC2t06804H Brassica oleracea
BolC9t58826H Brassica oleracea
BraA02t05373Z Brassica rapa
BraA10t44270Z Brassica rapa
C02p08950 Brassica napus
C09p59900 Brassica napus
CAN.G123.2 Capsicum annuum
CANSAT11G2533 Cannabis sativa
CARHR195920 Cardamine hirsuta
Carub.0006s1548 Capsella rubella
Ca_05760_v3 Cicer arietinum L.
Cc07_g12790 Coffea canephora
CDE04G2995 Ceratophyllum demersum
Cfa019426 Carpinus fangiana
Ciclev10005246m.g Citrus clementina
CiPaw.11G066500 Carya illinoinensis
ClCG05G010470 Citrullus lanatus
COL.COLO4_20049 Corchorus olitorius
Cpa.g.sc178.26 Carica papaya
Cpa.g.sc178.27 Carica papaya
Cre14.g630907 Chlamydomonas reinhardtii
CsaV3_3G018020 Cucumis sativus L.
CSS0031022 Camellia sinensis var. sinensis
DCAR_003407 Daucus carota
Dinv19079 Davidia involucrata
Duzib138G0191 Durio zibethinus
ECA246G5189 Erigeron canadensis
EL10Ac4g08929 Beta vulgaris
Eucgr.J01641 Eucalyptus grandis
FAN04G0499 Fragaria x ananassa
FAN08G1959 Fragaria x ananassa
FAN18G0334 Fragaria x ananassa
FvH4_5g28670 Fragaria vesca
Glyma.02G240700 Glycine max
Glyma.14G210200 Glycine max
Gohir.A11G169800 Gossypium hirsutum
Gohir.D11G176000 Gossypium hirsutum
Gorai.007G188600 Gossypium raimondii
GSVIVG01013049001 Vitis vinifera
HanXRQChr02g0046461 Helianthus annuus
HanXRQChr16g0508921 Helianthus annuus
HanXRQChr16g0532291 Helianthus annuus
Haze_08537 Corylus avellana
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla
HPP92_002577 Vanilla planifolia
HPP92_002578 Vanilla planifolia
Hund22204 Selenicereus undatus
Lalb_Chr17g0345871 Lupinus albus
Lj4A252G57 Lonicera japonica
LjContig00141g0009861 Lotus japonicus
Lsat_1_v5_gn_3_67061 Lactuca sativa
Manes.01G123200 Manihot esculenta
Manes.02G080800 Manihot esculenta
Mapoly0019s0054 Marchantia polymorpha
MBI06_g30602_MAGBIO Magnolia biondii
MD08G1242300 Malus domestica
MD15G1436000 Malus domestica
Medtr5g076920 Medicago truncatula
MELO3C019565.2 Cucumis melo
Migut.K00743 Erythranthe guttata
MSTRG.15638 Avicennia marina
Nitab4.5_0000005g0100 Nicotiana tabacum
Nitab4.5_0002648g0050 Nicotiana tabacum
Nn4g24719 Nelumbo nucifera
Oeu012318.2 Olea europaea
Os02g0117800 Oryza sativa ssp. japonica
Peaxi162Scf00294g00628 Petunia axillaris
PGR042G3996 Punica granatum
Phvul.008G241000 Phaseolus vulgaris
Potri.017G139700 Populus trichocarpa
Pp3c4_11110 Physcomitrium patens
Prupe.1G579800 Prunus persica
Psat2g042920 Pisum sativum
PSO063G3081 Papaver somniferum
PSO782G3474 Papaver somniferum
QL04p075158 Quercus lobata
QL04p075308 Quercus lobata
QL04p075322 Quercus lobata
QL04p075342 Quercus lobata
RcHm_v2.0_Chr2g0106631 Rosa chinensis
RcHm_v2.0_Chr5g0080521 Rosa chinensis
RcHm_v2.0_Chr7g0220631 Rosa chinensis
Rhsim10G0185200 Rhododendron simsii
Sabra17G0117900 Salix brachista
SalBow5G0086 Salvia bowleyana
SalBow5G5467 Salvia bowleyana
Sc09g0004490 Simmondsia chinensis
Sed0003951 Sechium edule
SEGI_25199 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32050 Striga asiatica
SMO116G0154 Selaginella moellendorffii
Solyc02g036380.3 Solanum lycopersicum
Solyc06g043140.4 Solanum lycopersicum
Sopen02g011760 Solanum pennellii
Sp6g26940 Schrenkiella parvula
TAR629G0059 Trochodendron aralioides
TAR629G1722 Trochodendron aralioides
THA.LOC104820862 Tarenaya hassleriana
Thecc.04G060400 Theobroma cacao
Thhalv10014026m.g Eutrema salsugineum
TPR.G5335 Trifolium pratense
TWI53G1019 Tripterygium wilfordii
TWI74G1437 Tripterygium wilfordii
unitig_0.g2639 Utricularia gibba
vmacro20467 Vaccinium macrocarpon
VMungo0647G0600 Vigna mungo
Zm00001eb230080 Zea mays

User provided reference genes

Program Settings