Gene: Sopen02g011760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g011760
  • Transcript Identifier Sopen02g011760.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 33955026-33971196 : positive

Gene Family Information

  • ID HOM05D006076
  • #Genes/#Species 130/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g011760.1

Descriptions

  • Description Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. | AUTOPHAGY 5 (APG5) | FUNCTIONS IN: transporter activity | INVOLVED IN: autophagy, leaf senescence, response to starvation | LOCATED IN: cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
InterProautophagy
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G17290
GO:0042594
ISO
PLAZA Integrative Orthologyresponse to starvation AT5G17290
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G17290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042526 Autophagy protein Atg5, helix rich domain
IPR007239 Autophagy-related protein 5
IPR042527 Autophagy protein Atg5, UblA domain
Mapman id Description
19.3.3.3.2 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG5)