Gene: AT5G17290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G17290
  • Transcript Identifier AT5G17290.1
  • Gene Type Coding gene
  • Location Chr5 : 5687160-5689821 : negative

Gene Family Information

  • ID HOM05D006076
  • #Genes/#Species 130/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G17290.1
  • symbol APG5
  • Alias ATATG5,ATG5,AUTOPHAGY 5
  • full_name AUTOPHAGY 5
  • uniprot Q9FFI2

Descriptions

  • Description autophagy protein Apg5 family
  • Computational description AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
IMP
Gene Ontologyautophagy1
GO:0006914
IEA
InterProautophagy
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006952
IEA
GOA Databasedefense response
GO:0006501
IBA
Gene OntologyC-terminal protein lipidation2
GO:0044804
IBA
Gene Ontologyautophagy of nucleus2
GO:0006995
IBA
Gene Ontologycellular response to nitrogen starvation2
GO:0000045
IBA
Gene Ontologyautophagosome assembly2
GO:0000422
IBA
Gene Ontologyautophagy of mitochondrion2
GO:0050832
IEP
Gene Ontologydefense response to fungus3
GO:0042594
IMP
Gene Ontologyresponse to starvation1
GO:0010150
IMP
Gene Ontologyleaf senescence1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034274
IBA
Gene OntologyAtg12-Atg5-Atg16 complex2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0034045
IBA
Gene Ontologyphagophore assembly site membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007239 Autophagy-related protein 5
IPR042527 Autophagy protein Atg5, UblA domain
IPR042526 Autophagy protein Atg5, helix rich domain
Mapman id Description
19.3.3.3.2 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG5)