Gene: Solyc02g036380.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g036380.3
  • Transcript Identifier Solyc02g036380.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 29354173-29368113 : positive

Gene Family Information

  • ID HOM05D006076
  • #Genes/#Species 130/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g036380.3.1
  • uniprot A0A3Q7EZE9
  • gene_id Solyc02g036380

Descriptions

  • Description Autophagy protein 5 (AHRD V3.3 *** A0A2G2XBD3_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
IEA
InterProautophagy
GO:0000422
IBA
GOA Databaseautophagy of mitochondrion
GO:0000045
IBA
GOA Databaseautophagosome assembly
GO:0006995
IBA
GOA Databasecellular response to nitrogen starvation
GO:0006501
IBA
GOA DatabaseC-terminal protein lipidation
GO:0044804
IBA
GOA Databaseautophagy of nucleus
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G17290
GO:0042594
ISO
PLAZA Integrative Orthologyresponse to starvation AT5G17290
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G17290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0034045
IBA
GOA Databasephagophore assembly site membrane
GO:0034274
IBA
GOA DatabaseAtg12-Atg5-Atg16 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042527 Autophagy protein Atg5, UblA domain
IPR042526 Autophagy protein Atg5, helix rich domain
IPR007239 Autophagy-related protein 5
Mapman id Description
19.3.3.3.2 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG5)