Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p46390 Brassica napus
Aa31LG11G2610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis
Actinidia13710 Actinidia chinensis
Actinidia38413 Actinidia chinensis
Ah.01g001560 Amaranthus hybridus
AL6G34310 Arabidopsis lyrata
Aqoxy3G04258 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea
AT5G23120 Arabidopsis thaliana
ATR0618G114 Amborella trichopoda
Atru.chr11.1117 Acer truncatum
AUR62015232 Chenopodium quinoa
AUR62015234 Chenopodium quinoa
AUR62017696 Chenopodium quinoa
AUR62024854 Chenopodium quinoa
BcaB04g19886 Brassica carinata
BolC7t44963H Brassica oleracea
BolC9t53702H Brassica oleracea
BraA03t13765Z Brassica rapa
C07p44410 Brassica napus
C09p07860 Brassica napus
C09p07870 Brassica napus
CAN.G157.24 Capsicum annuum
CANSAT56G2432 Cannabis sativa
CARHR190410 Cardamine hirsuta
Carub.0006s2091 Capsella rubella
Ca_19021_v3 Cicer arietinum L.
CBR_g11122 Chara braunii
Cc11_g02280 Coffea canephora
CDE04G0799 Ceratophyllum demersum
CDE07G0658 Ceratophyllum demersum
Cfa008738 Carpinus fangiana
Ciclev10031672m.g Citrus clementina
CiPaw.06G060100 Carya illinoinensis
ClCG09G004540 Citrullus lanatus
COL.COLO4_19602 Corchorus olitorius
Cpa.g.sc44.38 Carica papaya
Cre06.g273700 Chlamydomonas reinhardtii
CsaV3_7G030600 Cucumis sativus L.
CSS0012805 Camellia sinensis var. sinensis
DCAR_002576 Daucus carota
Dinv01185 Davidia involucrata
Dinv11718 Davidia involucrata
Duzib052G0297 Durio zibethinus
ECA246G1868 Erigeron canadensis
EL10Ac9g22946 Beta vulgaris
Eucgr.J00865 Eucalyptus grandis
FAN07G1379 Fragaria x ananassa
FAN12G1392 Fragaria x ananassa
FAN17G0887 Fragaria x ananassa
FvH4_4g36890 Fragaria vesca
Glyma.06G237300 Glycine max
Glyma.11G100800 Glycine max
Glyma.12G026900 Glycine max
Gohir.A03G164600 Gossypium hirsutum
Gohir.D02G187800 Gossypium hirsutum
Gorai.005G210500 Gossypium raimondii
GSVIVG01012045001 Vitis vinifera
HanXRQChr06g0171511 Helianthus annuus
HanXRQChr10g0318441 Helianthus annuus
HanXRQChr17g0544921 Helianthus annuus
Haze_11755 Corylus avellana
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla
HPP92_012878 Vanilla planifolia
Hund08579 Selenicereus undatus
Lalb_Chr03g0024761 Lupinus albus
Lj3A850G95 Lonicera japonica
Lj3g0024041 Lotus japonicus
Lsat_1_v5_gn_3_35480 Lactuca sativa
Manes.04G064200 Manihot esculenta
Manes.11G108100 Manihot esculenta
Mapoly0020s0149 Marchantia polymorpha
MCO05G498 Micromonas commoda
MD00G1043400 Malus domestica
MD13G1005900 Malus domestica
MD15G1106700 Malus domestica
MD16G1002000 Malus domestica
Medtr4g075040 Medicago truncatula
MELO3C023596.2 Cucumis melo
Migut.E00699 Erythranthe guttata
MSTRG.431 Avicennia marina
Nitab4.5_0000133g0050 Nicotiana tabacum
Nitab4.5_0006277g0020 Nicotiana tabacum
Nn3g18651 Nelumbo nucifera
Oeu026903.3 Olea europaea
Os06g0729650 Oryza sativa ssp. japonica
Peaxi162Scf00363g00317 Petunia axillaris
PGR044G2022 Punica granatum
PGSC0003DMG400002324 Solanum tuberosum
Phvul.011G029800 Phaseolus vulgaris
Potri.007G071300 Populus trichocarpa
Pp3c15_7930 Physcomitrium patens
Pp3c9_10350 Physcomitrium patens
PRCOL_00000217 Prasinoderma coloniale
Prupe.1G347100 Prunus persica
Psat7g177360 Pisum sativum
PSO063G6567 Papaver somniferum
PSO782G0234 Papaver somniferum
QL03p045967 Quercus lobata
RcHm_v2.0_Chr4g0446671 Rosa chinensis
Rhsim04G0167300 Rhododendron simsii
Sabra07G0060100 Salix brachista
SalBow2G1456 Salvia bowleyana
Sc10g0006780 Simmondsia chinensis
Sed0006813 Sechium edule
Sed0023953 Sechium edule
SEGI_27749 Sequoiadendron giganteum
SEGI_34707 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20111 Striga asiatica
SGA_v2.0_scaffold88G27230 Striga asiatica
SMO347G0352 Selaginella moellendorffii
Solyc02g014150.4 Solanum lycopersicum
Sopen02g003530 Solanum pennellii
Sp2g24000 Schrenkiella parvula
TAR629G1998 Trochodendron aralioides
THA.LOC104800911 Tarenaya hassleriana
Thecc.02G160200 Theobroma cacao
Thhalv10004338m.g Eutrema salsugineum
TPR.G32343 Trifolium pratense
TWI53G1952 Tripterygium wilfordii
unitig_8.g2892 Utricularia gibba
vmacro08597 Vaccinium macrocarpon
VMungo0647G2306 Vigna mungo
VMungo1127G1047 Vigna mungo
Zm00001eb227280 Zea mays
Zm00001eb271820 Zea mays

User provided reference genes

Program Settings