Gene: Lsat_1_v5_gn_3_35480

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_3_35480
  • Transcript Identifier Lsat_1_v5_gn_3_35480.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_3 : 45410014-45412510 : negative

Gene Family Information

  • ID HOM05D005984
  • #Genes/#Species 131/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_3_35480.v5
  • pacid 38916142

Descriptions

  • Description PTHR32010:SF6 - PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0065003
ISO
PLAZA Integrative Orthologyprotein-containing complex assembly AT5G23120
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G23120
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT5G23120

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G23120
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G23120
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT5G23120
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT5G23120
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G23120
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid AT5G23120
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G23120
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G23120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain
IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
1.1.1.3.5 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (HCF136)