Gene: HanXRQChr06g0171511
General Information
Structural Information
- Species Helianthus annuus
- Gene Identifier HanXRQChr06g0171511
- Transcript Identifier HanXRQChr06g0171511.r1.2.494
- Gene Type Coding gene
- Location HanXRQChr06 : 20601467-20604045 : negative
Gene Family Information
- ID HOM05D005984
- #Genes/#Species 131/98
- Phylogenetic origin
- ID ORTHO05D007754
- #Genes/#Species 127/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id HanXRQChr06g0171511.r1.2
- pacid 40330592
Descriptions
- Description Probable ycf48-like protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0065003 | ISO | PLAZA Integrative Orthology | protein-containing complex assembly | AT5G23120 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G23120 |
| GO:0009657 | ISO | PLAZA Integrative Orthology | plastid organization | AT5G23120 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G23120 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G23120 |
| GO:0031977 | ISO | PLAZA Integrative Orthology | thylakoid lumen | AT5G23120 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT5G23120 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G23120 |
| GO:0009533 | ISO | PLAZA Integrative Orthology | chloroplast stromal thylakoid | AT5G23120 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G23120 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT5G23120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR028203 | Photosynthesis system II assembly factor Ycf48/Hcf136-like domain |
| IPR016705 | Photosynthesis system II assembly factor Ycf48/Hcf136 |
| IPR019546 | Twin-arginine translocation pathway, signal sequence, bacterial/archaeal |
| Mapman id | Description |
|---|---|
| 1.1.1.3.5 | Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (HCF136) |