Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p29280 Brassica napus
Aa31LG8G6610 Aethionema arabicum
Actinidia04315 Actinidia chinensis
AL3G33350 Arabidopsis lyrata
Aqoxy3G04280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RUY2TK Arachis hypogaea
AT3G19840 Arabidopsis thaliana
ATR0618G038 Amborella trichopoda
ATR0618G367 Amborella trichopoda
Atru.chr11.1229 Acer truncatum
Atru.chr11.1316 Acer truncatum
AUR62015199 Chenopodium quinoa
AUR62017662 Chenopodium quinoa
BcaB06g26053 Brassica carinata
BcaC05g28400 Brassica carinata
BolC5t33205H Brassica oleracea
BraA05t21811Z Brassica rapa
BraA07t28417Z Brassica rapa
C05p44790 Brassica napus
CAN.G419.29 Capsicum annuum
CANSAT64G0121 Cannabis sativa
CARHR095360 Cardamine hirsuta
Carub.0003s1972 Capsella rubella
Ca_03031_v3 Cicer arietinum L.
Ca_03032_v3 Cicer arietinum L.
CBR_g3777 Chara braunii
CDE04G0879 Ceratophyllum demersum
CDE04G3187 Ceratophyllum demersum
CDE08G0300 Ceratophyllum demersum
Cfa008717 Carpinus fangiana
Cfa025123 Carpinus fangiana
Ciclev10030612m.g Citrus clementina
CiPaw.05G166700 Carya illinoinensis
ClCG09G001670 Citrullus lanatus
COL.COLO4_16625 Corchorus olitorius
COL.COLO4_27510 Corchorus olitorius
Cpa.g.c31481.2 Carica papaya
Cpa.g.sc63.9 Carica papaya
Cre09.g393551 Chlamydomonas reinhardtii
CsaV3_7G033650 Cucumis sativus L.
CSS0007611 Camellia sinensis var. sinensis
DCAR_006599 Daucus carota
Dinv12052 Davidia involucrata
Duzib251G0270 Durio zibethinus
ECA246G1682 Erigeron canadensis
ECA246G3641 Erigeron canadensis
EL10Ac9g22918 Beta vulgaris
Eucgr.G02565 Eucalyptus grandis
FAN07G0309 Fragaria x ananassa
FAN12G0559 Fragaria x ananassa
FAN17G1621 Fragaria x ananassa
FvH4_4g36700 Fragaria vesca
Glyma.11G102600 Glycine max
Glyma.11G103100 Glycine max
Glyma.12G028100 Glycine max
Gohir.A01G145818 Gossypium hirsutum
Gohir.D01G138300 Gossypium hirsutum
Gorai.002G167700 Gossypium raimondii
GSVIVG01010209001 Vitis vinifera
HanXRQChr13g0425271 Helianthus annuus
HanXRQChr17g0540691 Helianthus annuus
Haze_11727 Corylus avellana
Hma1.2p1_0933F.1_g238315 Hydrangea macrophylla
Hma1.2p1_2428F.1_g322000 Hydrangea macrophylla
HPP92_015160 Vanilla planifolia
Lalb_Chr01g0001511 Lupinus albus
Lj3g0019719 Lotus japonicus
Lju1295A4T31 Lonicera japonica
Lsat_1_v5_gn_0_9300 Lactuca sativa
Lsat_1_v5_gn_8_74860 Lactuca sativa
Manes.03G080900 Manihot esculenta
Mapoly0048s0088 Marchantia polymorpha
MBI03_g33918_MAGBIO Magnolia biondii
MCO09G642 Micromonas commoda
MD13G1007900 Malus domestica
MD13G1008000 Malus domestica
MD16G1000200 Malus domestica
Medtr4g074440 Medicago truncatula
MELO3C024279.2 Cucumis melo
Migut.N00351 Erythranthe guttata
Nitab4.5_0000129g0230 Nicotiana tabacum
Nitab4.5_0000129g0240 Nicotiana tabacum
Nitab4.5_0001983g0010 Nicotiana tabacum
Nitab4.5_0005621g0040 Nicotiana tabacum
Nitab4.5_0010403g0020 Nicotiana tabacum
Nn3g18680 Nelumbo nucifera
Oeu006722.1 Olea europaea
Oeu022359.1 Olea europaea
Os10g0485000 Oryza sativa ssp. japonica
Peaxi162Scf00329g00515 Petunia axillaris
PGR142G1078 Punica granatum
Phvul.011G031500 Phaseolus vulgaris
Potri.008G085150 Populus trichocarpa
Potri.010G170400 Populus trichocarpa
Pp3c11_2890 Physcomitrium patens
Pp3c7_20890 Physcomitrium patens
Prupe.1G345100 Prunus persica
Psat5g190360 Pisum sativum
Psat7g176560 Pisum sativum
Psat7g176600 Pisum sativum
PSO063G6838 Papaver somniferum
PSO782G0435 Papaver somniferum
QL03p043450 Quercus lobata
QL03p043467 Quercus lobata
QL05p039874 Quercus lobata
RcHm_v2.0_Chr4g0446421 Rosa chinensis
Rhsim09G0071900 Rhododendron simsii
Sabra10G0130100 Salix brachista
Sc10g0007040 Simmondsia chinensis
Sed0021796 Sechium edule
SEGI_19557 Sequoiadendron giganteum
SEGI_27443 Sequoiadendron giganteum
SEGI_30722 Sequoiadendron giganteum
SGA_v2.0_scaffold317G48430 Striga asiatica
SMO347G0007 Selaginella moellendorffii
Solyc04g008700.3 Solanum lycopersicum
Sopen04g003870 Solanum pennellii
Sp3g17850 Schrenkiella parvula
TAR371G0645 Trochodendron aralioides
TAR371G1124 Trochodendron aralioides
Thecc.02G295800 Theobroma cacao
Thhalv10020134m.g Eutrema salsugineum
TPR.G21563 Trifolium pratense
TWI53G0095 Tripterygium wilfordii
TWI74G1493 Tripterygium wilfordii
unitig_26.g9977 Utricularia gibba
vmacro16014 Vaccinium macrocarpon
vmacro16015 Vaccinium macrocarpon
VMungo1127G1981 Vigna mungo
Zm00001eb221360 Zea mays

User provided reference genes

Program Settings