Gene: FAN12G0559

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN12G0559
Transcript Identifier FAN12G0559.1
Gene Type Coding gene
Location Fvb4-3 : 296022-312222 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005906
#Genes/#Species 133/90
Phylogenetic origin

ID ORTHO05D007359
#Genes/#Species 131/90
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb4-3-snap-gene-3.68.v1.0.a1
pacid 50473023

Descriptions

Short descriptions
Ortholog descriptions

Description K12824 - transcription elongation regulator 1 (TCERG1, CA150)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT3G19840

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003712	IEA	InterPro	transcription coregulator activity
GO:0070063	IEA	InterPro	RNA polymerase binding
GO:0003676	IEA	InterPro	nucleic acid binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036517	FF domain superfamily
IPR036443	Zinc finger, RanBP2-type superfamily
IPR001202	WW domain
IPR036020	WW domain superfamily
IPR002713	FF domain
IPR027356	NPH3 domain
IPR045148	Transcription elongation regulator 1-like
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR001876	Zinc finger, RanBP2-type
IPR035979	RNA-binding domain superfamily

Mapman id	Description
15.3.4.2.10	RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF15
16.2.1.1.5.5	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40C)
19.2.2.8.2.2.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (BPH1)