Gene: SGA_v2.0_scaffold317G48430

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold317G48430
Transcript Identifier SGA_v2.0_scaffold317T48430
Gene Type Coding gene
Location scaffold317 : 24103-44829 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005906
#Genes/#Species 133/90
Phylogenetic origin

ID ORTHO05D007359
#Genes/#Species 131/90
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Pre-mRNA-processing protein PRP40, putative

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT3G19840

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003712	IEA	InterPro	transcription coregulator activity
GO:0070063	IEA	InterPro	RNA polymerase binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001202	WW domain
IPR002713	FF domain
IPR036517	FF domain superfamily
IPR036020	WW domain superfamily
IPR045148	Transcription elongation regulator 1-like

Mapman id	Description
16.2.1.1.5.5	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40C)