Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p28980 Brassica napus
A07p40790 Brassica napus
Aa31LG4G5410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2225 Anthoceros agrestis
Actinidia15328 Actinidia chinensis
Actinidia22546 Actinidia chinensis
Ah.05g173260 Amaranthus hybridus
AL2G35110 Arabidopsis lyrata
Aqoxy6G01108 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B18DRP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K656SJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R41T5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T0WXUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1EDB6 Arachis hypogaea
AT1G75200 Arabidopsis thaliana
ATR0733G119 Amborella trichopoda
Atru.chr13.482 Acer truncatum
AUR62013733 Chenopodium quinoa
AUR62023420 Chenopodium quinoa
BcaB02g07015 Brassica carinata
BolC6t38398H Brassica oleracea
BolC6t39951H Brassica oleracea
BraA07t30539Z Brassica rapa
BraA07t31621Z Brassica rapa
C06p32750 Brassica napus
C06p49180 Brassica napus
CAN.G1226.12 Capsicum annuum
CANSAT35G0174 Cannabis sativa
CARHR068530 Cardamine hirsuta
Carub.0002s2201 Capsella rubella
Ca_13375_v3 Cicer arietinum L.
CBR_g26428 Chara braunii
CBR_g42175 Chara braunii
Cc10_g02880 Coffea canephora
Cc10_g02890 Coffea canephora
CDE01G0181 Ceratophyllum demersum
Cfa018151 Carpinus fangiana
Cfa025522 Carpinus fangiana
Ciclev10003946m.g Citrus clementina
CiPaw.16G056600 Carya illinoinensis
CiPaw.16G057000 Carya illinoinensis
ClCG08G015110 Citrullus lanatus
COL.COLO4_26317 Corchorus olitorius
Cpa.g.sc36.76 Carica papaya
Cre14.g623300 Chlamydomonas reinhardtii
CsaV3_2G028680 Cucumis sativus L.
CSS0006033 Camellia sinensis var. sinensis
DCAR_020974 Daucus carota
Dinv36081 Davidia involucrata
Duzib116G0609 Durio zibethinus
ECA247G2683 Erigeron canadensis
EL10Ac1g00774 Beta vulgaris
Eucgr.F01897 Eucalyptus grandis
FAN15G3081 Fragaria x ananassa
FAN20G0176 Fragaria x ananassa
FAN20G3094 Fragaria x ananassa
FAN27G0156 Fragaria x ananassa
FvH4_2g39810 Fragaria vesca
Glyma.14G075000 Glycine max
Glyma.17G250400 Glycine max
Gohir.A01G115800 Gossypium hirsutum
Gohir.A05G194001 Gossypium hirsutum
Gohir.D01G104100 Gossypium hirsutum
Gohir.D05G197166 Gossypium hirsutum
Gohir.D05G197232 Gossypium hirsutum
Gorai.002G128000 Gossypium raimondii
Gorai.009G202100 Gossypium raimondii
GSVIVG01009707001 Vitis vinifera
HanXRQChr02g0042111 Helianthus annuus
Haze_17969 Corylus avellana
Hma1.2p1_1139F.1_g260870 Hydrangea macrophylla
HPP92_012274 Vanilla planifolia
Hund17082 Selenicereus undatus
Lalb_Chr14g0369301 Lupinus albus
Lj1g0001767 Lotus japonicus
Lj4A40T46 Lonicera japonica
Lj5g0008078 Lotus japonicus
Lsat_1_v5_gn_1_17721 Lactuca sativa
Manes.18G027000 Manihot esculenta
Mapoly0010s0191 Marchantia polymorpha
MBI16_g31221_MAGBIO Magnolia biondii
MCO11G535 Micromonas commoda
MD08G1031900 Malus domestica
MD15G1027800 Malus domestica
Medtr1g022225 Medicago truncatula
Medtr1g022235 Medicago truncatula
MELO3C010940.2 Cucumis melo
Migut.C00727 Erythranthe guttata
MSTRG.1277 Avicennia marina
Nitab4.5_0005373g0030 Nicotiana tabacum
Nitab4.5_0006280g0010 Nicotiana tabacum
Nn1g04993 Nelumbo nucifera
Nn7g38354 Nelumbo nucifera
Oeu049954.1 Olea europaea
Os03g0775300 Oryza sativa ssp. japonica
Os10g0365900 Oryza sativa ssp. japonica
Peaxi162Scf00417g01212 Petunia axillaris
PGR031G0193 Punica granatum
PGSC0003DMG400004542 Solanum tuberosum
Phvul.001G014532 Phaseolus vulgaris
Potri.002G260700 Populus trichocarpa
Pp3c8_14160 Physcomitrium patens
PRCOL_00005119 Prasinoderma coloniale
Prupe.1G379500 Prunus persica
Psat6g008800 Pisum sativum
PSO541G0294 Papaver somniferum
PSO675G8513 Papaver somniferum
QL02p008579 Quercus lobata
QL02p008596 Quercus lobata
RcHm_v2.0_Chr6g0301031 Rosa chinensis
Rhsim07G0239300 Rhododendron simsii
Sabra02G0198400 Salix brachista
SalBow7G2715 Salvia bowleyana
Sc02g0006150 Simmondsia chinensis
Sed0003570 Sechium edule
Sed0016731 Sechium edule
SGA_v2.0_scaffold54G19521 Striga asiatica
SMO119G0034 Selaginella moellendorffii
Solyc04g080340.3 Solanum lycopersicum
Sopen04g033930 Solanum pennellii
Sp5g30360 Schrenkiella parvula
TAR381G1506 Trochodendron aralioides
THA.LOC104809061 Tarenaya hassleriana
Thecc.08G026700 Theobroma cacao
Thhalv10018304m.g Eutrema salsugineum
TPR.G20173 Trifolium pratense
TWI36G0400 Tripterygium wilfordii
TWI56G0568 Tripterygium wilfordii
unitig_37.g12994 Utricularia gibba
vmacro04525 Vaccinium macrocarpon
vmacro04526 Vaccinium macrocarpon
vmacro11198 Vaccinium macrocarpon
VMungo0647G1182 Vigna mungo
Zm00001eb059170 Zea mays

User provided reference genes

Program Settings