Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16440 Brassica napus
A09p57740 Brassica napus
Aa31LG7G14570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis
Actinidia31890 Actinidia chinensis
AL4G11110 Arabidopsis lyrata
AL4G11490 Arabidopsis lyrata
Aqoxy4G02517 Aquilegia oxysepala
Aqoxy5G02041 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea
AT2G21800 Arabidopsis thaliana
AT2G22140 Arabidopsis thaliana
ATR0800G169 Amborella trichopoda
Atru.chr4.723 Acer truncatum
AUR62003644 Chenopodium quinoa
AUR62044022 Chenopodium quinoa
BcaB06g27789 Brassica carinata
BcaB08g35041 Brassica carinata
BcaC02g08761 Brassica carinata
BcaC07g41093 Brassica carinata
BolC4t26687H Brassica oleracea
BolC7t42688H Brassica oleracea
BolC8t51659H Brassica oleracea
BraA04t17279Z Brassica rapa
BraA09t41166Z Brassica rapa
C04p50950 Brassica napus
C08p40960 Brassica napus
CAN.G860.4 Capsicum annuum
CANSAT01G2349 Cannabis sativa
CARHR112840 Cardamine hirsuta
CARHR113290 Cardamine hirsuta
CARHR113310 Cardamine hirsuta
Carub.0004s0085 Capsella rubella
Carub.0004s0131 Capsella rubella
Ca_17674_v3 Cicer arietinum L.
CBR_g21043 Chara braunii
Cc07_g16660 Coffea canephora
CDE07G0129 Ceratophyllum demersum
Cfa002785 Carpinus fangiana
Ciclev10025290m.g Citrus clementina
CiPaw.03G131700 Carya illinoinensis
ClCG01G015860 Citrullus lanatus
COL.COLO4_03471 Corchorus olitorius
Cpa.g.sc72.53 Carica papaya
Cpa.g.sc72.54 Carica papaya
CsaV3_6G042140 Cucumis sativus L.
CSS0023800 Camellia sinensis var. sinensis
DCAR_016672 Daucus carota
Dinv16426 Davidia involucrata
ECA238G1732 Erigeron canadensis
EL10Ac6g15224 Beta vulgaris
Eucgr.I00295 Eucalyptus grandis
FAN18G1125 Fragaria x ananassa
FAN19G0143 Fragaria x ananassa
FAN23G1488 Fragaria x ananassa
FAN26G2893 Fragaria x ananassa
FAN28G2237 Fragaria x ananassa
FvH4_1g23210 Fragaria vesca
FvH4_5g31350 Fragaria vesca
Glyma.05G186200 Glycine max
Glyma.08G144700 Glycine max
Gohir.A10G082700 Gossypium hirsutum
Gohir.D10G105000 Gossypium hirsutum
Gorai.011G114700 Gossypium raimondii
GSVIVG01022267001 Vitis vinifera
HanXRQChr09g0254171 Helianthus annuus
Haze_25082 Corylus avellana
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla
HPP92_017324 Vanilla planifolia
Hund03512 Selenicereus undatus
Hund19626 Selenicereus undatus
Lalb_Chr12g0203421 Lupinus albus
Lj4C861G1 Lonicera japonica
Lj4g0013346 Lotus japonicus
Lsat_1_v5_gn_4_138380 Lactuca sativa
Manes.12G145400 Manihot esculenta
Mapoly0041s0060 Marchantia polymorpha
MD15G1335700 Malus domestica
MD15G1404100 Malus domestica
Medtr8g092300 Medicago truncatula
MELO3C007452.2 Cucumis melo
Migut.L00055 Erythranthe guttata
MSTRG.15762 Avicennia marina
MSTRG.15763 Avicennia marina
Nitab4.5_0000184g0070 Nicotiana tabacum
Nitab4.5_0011929g0010 Nicotiana tabacum
Nitab4.5_0021115g0010 Nicotiana tabacum
Nn5g28812 Nelumbo nucifera
Oeu001980.1 Olea europaea
Oeu028353.1 Olea europaea
Os04g0648700 Oryza sativa ssp. japonica
Peaxi162Scf00025g03317 Petunia axillaris
PGR119G1966 Punica granatum
PGSC0003DMG400019704 Solanum tuberosum
Phvul.002G267400 Phaseolus vulgaris
Potri.007G077400 Populus trichocarpa
Pp3c5_3310 Physcomitrium patens
Prupe.1G550600 Prunus persica
Prupe.6G166800 Prunus persica
Psat7g049960 Pisum sativum
Psat7g050000 Pisum sativum
PSO170G4940 Papaver somniferum
QL06p031408 Quercus lobata
RcHm_v2.0_Chr2g0117911 Rosa chinensis
RcHm_v2.0_Chr7g0226611 Rosa chinensis
Rhsim10G0147200 Rhododendron simsii
Sabra07G0065400 Salix brachista
SalBow5G2484 Salvia bowleyana
SalBow5G4900 Salvia bowleyana
Sc03g0004580 Simmondsia chinensis
Sed0016319 Sechium edule
SEGI_24036 Sequoiadendron giganteum
SEGI_25471 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17685 Striga asiatica
SMO288G0013 Selaginella moellendorffii
SMO352G0072 Selaginella moellendorffii
SMO352G0093 Selaginella moellendorffii
Solyc04g051490.3 Solanum lycopersicum
Sopen04g022870 Solanum pennellii
Sopen10g026440 Solanum pennellii
Sp4g00940 Schrenkiella parvula
Sp4g01220 Schrenkiella parvula
TAR628G0341 Trochodendron aralioides
THA.LOC104804137 Tarenaya hassleriana
Thecc.01G117000 Theobroma cacao
Thhalv10000104m.g Eutrema salsugineum
Thhalv10000122m.g Eutrema salsugineum
TPR.G2233 Trifolium pratense
TWI79G0191 Tripterygium wilfordii
unitig_37.g12529 Utricularia gibba
unitig_37.g12530 Utricularia gibba
vmacro12878 Vaccinium macrocarpon
VMungo0251G2366 Vigna mungo
Zm00001eb068550 Zea mays

User provided reference genes

Program Settings