Gene: Solyc04g051490.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g051490.3
  • Transcript Identifier Solyc04g051490.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 49840239-49852578 : negative

Gene Family Information

  • ID HOM05D005778
  • #Genes/#Species 135/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g051490.3.1
  • uniprot A0A3Q7G4W9
  • gene_id Solyc04g051490

Descriptions

  • Description Crossover junction endonuclease EME1B (AHRD V3.3 *** A0A2G2VFP4_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation Os04g0648700
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV Os04g0648700
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity Os04g0648700
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0048476
IEA
InterProHolliday junction resolvase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006166 ERCC4 domain
IPR042530 EME1/EME2, C-terminal domain
IPR033310 Mms4/EME1/EME2
Mapman id Description
13.3.5.5.2.1.1.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component EME1