Gene: Os04g0648700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0648700
  • Transcript Identifier Os04t0648700-01
  • Gene Type Coding gene
  • Location chr04 : 33006434-33012493 : positive

Gene Family Information

  • ID HOM05D005778
  • #Genes/#Species 135/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0648700-01
  • MSU-ID LOC_Os04g55500.1
  • uniprot Q0J9J6

Descriptions

  • Description DNA repair nuclease, XPF-type/Helicase domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0010332
IEP
GOA Databaseresponse to gamma radiation
GO:0009644
IEP
GOA Databaseresponse to high light intensity
GO:0009411
IEP
GOA Databaseresponse to UV
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006310
IEA
GOA DatabaseDNA recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048476
IEA
GOA DatabaseHolliday junction resolvase complex
GO:0048476
IEA
InterProHolliday junction resolvase complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033310 Mms4/EME1/EME2
IPR006166 ERCC4 domain
IPR042530 EME1/EME2, C-terminal domain
Mapman id Description
13.3.5.5.2.1.1.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component EME1