Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p14370 Brassica napus
A08p30430 Brassica napus
Aa31LG6G9300 Aethionema arabicum
Actinidia03480 Actinidia chinensis
Ah.05g170870 Amaranthus hybridus
AL1G30720 Arabidopsis lyrata
Aqoxy7G02121 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea
AT1G18340 Arabidopsis thaliana
ATR0684G165 Amborella trichopoda
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum
AUR62019050 Chenopodium quinoa
AUR62027890 Chenopodium quinoa
BcaB03g12976 Brassica carinata
BcaB07g31845 Brassica carinata
BcaC05g25728 Brassica carinata
BcaNung05442 Brassica carinata
BolC5t30360H Brassica oleracea
BolC8t49486H Brassica oleracea
BraA06t24565Z Brassica rapa
BraA08t34975Z Brassica rapa
C05p16610 Brassica napus
C08p18540 Brassica napus
CAN.G628.77 Capsicum annuum
CAN.G964.16 Capsicum annuum
CANSAT54G1242 Cannabis sativa
CARHR018930 Cardamine hirsuta
CARHR138110 Cardamine hirsuta
Carub.0001s1797 Capsella rubella
Ca_15193_v3 Cicer arietinum L.
Ca_31116_v3 Cicer arietinum L.
CBR_g36358 Chara braunii
Cc04_g13870 Coffea canephora
CDE06G0499 Ceratophyllum demersum
CDE12G0551 Ceratophyllum demersum
Cfa016005 Carpinus fangiana
Cfa025530 Carpinus fangiana
Ciclev10002002m.g Citrus clementina
CiPaw.05G223000 Carya illinoinensis
ClCG08G005590 Citrullus lanatus
COL.COLO4_35944 Corchorus olitorius
Cpa.g.sc36.54 Carica papaya
Cre03.g172050 Chlamydomonas reinhardtii
CsaV3_2G009350 Cucumis sativus L.
CSS0020697 Camellia sinensis var. sinensis
CSS0036035 Camellia sinensis var. sinensis
DCAR_017415 Daucus carota
Dinv07241 Davidia involucrata
Duzib041G0760 Durio zibethinus
Duzib093G1836 Durio zibethinus
ECA246G0276 Erigeron canadensis
EL10Ac1g01047 Beta vulgaris
Eucgr.G01112 Eucalyptus grandis
FAN15G2492 Fragaria x ananassa
FAN20G0890 Fragaria x ananassa
FAN24G3468 Fragaria x ananassa
FAN27G1664 Fragaria x ananassa
FvH4_2g26720 Fragaria vesca
Glyma.04G250400 Glycine max
Glyma.06G112400 Glycine max
Gohir.A05G234600 Gossypium hirsutum
Gohir.D05G236900 Gossypium hirsutum
Gorai.009G245300 Gossypium raimondii
GSVIVG01008884001 Vitis vinifera
HanXRQChr02g0053121 Helianthus annuus
HanXRQChr09g0274411 Helianthus annuus
HanXRQChr16g0532671 Helianthus annuus
Haze_00457 Corylus avellana
Haze_00458 Corylus avellana
HPP92_013333 Vanilla planifolia
Hund27024 Selenicereus undatus
Lalb_Chr23g0270981 Lupinus albus
Lj1g0021555 Lotus japonicus
Lj4A622G15 Lonicera japonica
Lj4A622G16 Lonicera japonica
Lsat_1_v5_gn_3_69700 Lactuca sativa
Manes.02G162200 Manihot esculenta
Mapoly0044s0012 Marchantia polymorpha
MBI03_g33030_MAGBIO Magnolia biondii
MCO01G384 Micromonas commoda
MD15G1351400 Malus domestica
Medtr3g072430 Medicago truncatula
MELO3C008774.2 Cucumis melo
Migut.D01926 Erythranthe guttata
Nitab4.5_0000003g0570 Nicotiana tabacum
Nitab4.5_0000866g0090 Nicotiana tabacum
Nitab4.5_0001017g0060 Nicotiana tabacum
Nn8g39974 Nelumbo nucifera
Oeu022164.1 Olea europaea
Oeu024691.1 Olea europaea
Os02g0125800 Oryza sativa ssp. japonica
Peaxi162Scf00689g00225 Petunia axillaris
PGR042G1492 Punica granatum
PGSC0003DMG400026996 Solanum tuberosum
Phvul.009G124300 Phaseolus vulgaris
Potri.005G176600 Populus trichocarpa
Pp3c2_3680 Physcomitrium patens
PRCOL_00005856 Prasinoderma coloniale
Prupe.1G500100 Prunus persica
Psat5g132360 Pisum sativum
Psat5g132400 Pisum sativum
PSO170G2981 Papaver somniferum
PSO782G2082 Papaver somniferum
QL09p035347 Quercus lobata
QL09p036498 Quercus lobata
RcHm_v2.0_Chr6g0295621 Rosa chinensis
Rhsim02G0185400 Rhododendron simsii
Rhsim03G0117800 Rhododendron simsii
Rhsim11G0047100 Rhododendron simsii
RhsimUnG0093400 Rhododendron simsii
RhsimUnG0102200 Rhododendron simsii
Sabra05G0133300 Salix brachista
SalBow3G0912 Salvia bowleyana
SalBow3G3353 Salvia bowleyana
SalBow7G1071 Salvia bowleyana
Sc01g0001200 Simmondsia chinensis
Sed0022578 Sechium edule
Sed0025863 Sechium edule
SEGI_10746 Sequoiadendron giganteum
SEGI_11087 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12915 Striga asiatica
SMO358G0086 Selaginella moellendorffii
Solyc06g071450.4 Solanum lycopersicum
Sopen06g027730 Solanum pennellii
Sp1g16310 Schrenkiella parvula
TAR628G1424 Trochodendron aralioides
THA.LOC104806819 Tarenaya hassleriana
Thecc.08G123600 Theobroma cacao
Thhalv10008316m.g Eutrema salsugineum
TPR.G24041 Trifolium pratense
TPR.G32 Trifolium pratense
TWI75G0111 Tripterygium wilfordii
TWI79G0333 Tripterygium wilfordii
vmacro00825 Vaccinium macrocarpon
vmacro14329 Vaccinium macrocarpon
Zm00001eb208710 Zea mays

User provided reference genes

Program Settings