Gene: Solyc06g071450.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g071450.4
  • Transcript Identifier Solyc06g071450.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 41624228-41629290 : negative

Gene Family Information

  • ID HOM05D005614
  • #Genes/#Species 137/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g071450.4.1
  • uniprot A0A3Q7GY47
  • gene_id Solyc06g071450

Descriptions

  • Description Basal transcription factor complex subunit-related protein (AHRD V3.3 *** A0A2U1PCL8_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IBA
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0070816
IBA
GOA Databasephosphorylation of RNA polymerase II C-terminal domain

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000439
IBA
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005675
IBA
GOA Databasetranscription factor TFIIH holo complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004600 TFIIH subunit Tfb4/GTF2H3
IPR036465 von Willebrand factor A-like domain superfamily
Mapman id Description
14.6.3.2.6 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB4
15.3.3.5.1.6 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB4