Gene: Os02g0125800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0125800
  • Transcript Identifier Os02t0125800-01
  • Gene Type Coding gene
  • Location chr02 : 1347868-1351187 : negative

Gene Family Information

  • ID HOM05D005614
  • #Genes/#Species 137/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0125800-01
  • MSU-ID LOC_Os02g03340.4
  • MSU-ID LOC_Os02g03340.5
  • MSU-ID LOC_Os02g03340.2
  • MSU-ID LOC_Os02g03340.3
  • MSU-ID LOC_Os02g03340.1
  • uniprot Q6Z2N2

Descriptions

  • Description Transcription factor Tfb4 family protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IBA
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0070816
IBA
GOA Databasephosphorylation of RNA polymerase II C-terminal domain

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000439
IBA
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005675
IBA
GOA Databasetranscription factor TFIIH holo complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004600 TFIIH subunit Tfb4/GTF2H3
IPR036465 von Willebrand factor A-like domain superfamily
Mapman id Description
14.6.3.2.6 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB4
15.3.3.5.1.6 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB4