Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30680 Brassica napus
Aa31LG11G6690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis
Actinidia29697 Actinidia chinensis
Actinidia33928 Actinidia chinensis
Ah.04g164520 Amaranthus hybridus
AL6G15570 Arabidopsis lyrata
Aqoxy4G02586 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea
AT5G05680 Arabidopsis thaliana
ATR0193G007 Amborella trichopoda
Atru.chr12.24 Acer truncatum
AUR62012239 Chenopodium quinoa
AUR62022871 Chenopodium quinoa
BcaB05g21701 Brassica carinata
BcaC06g32273 Brassica carinata
BcaC06g32275 Brassica carinata
BolC9t59878H Brassica oleracea
BraA10t45109Z Brassica rapa
C09p71160 Brassica napus
CAN.G1694.1 Capsicum annuum
CANSAT56G2522 Cannabis sativa
CARHR207600 Cardamine hirsuta
Carub.0006s0457 Capsella rubella
Ca_15119_v3 Cicer arietinum L.
CBR_g22013 Chara braunii
Cc02_g06620 Coffea canephora
CDE04G1676 Ceratophyllum demersum
CDE04G3215 Ceratophyllum demersum
Cfa001325 Carpinus fangiana
Ciclev10030725m.g Citrus clementina
CiPaw.01G297900 Carya illinoinensis
ClCG07G004120 Citrullus lanatus
COL.COLO4_25704 Corchorus olitorius
Cpa.g.sc19.181 Carica papaya
Cre06.g278900 Chlamydomonas reinhardtii
CsaV3_5G010080 Cucumis sativus L.
CSS0043358 Camellia sinensis var. sinensis
DCAR_011807 Daucus carota
Dinv17986 Davidia involucrata
Dinv17987 Davidia involucrata
Dinv17988 Davidia involucrata
Duzib106G1755 Durio zibethinus
ECA238G2434 Erigeron canadensis
EL10Ac2g04818 Beta vulgaris
Eucgr.J00217 Eucalyptus grandis
FAN01G2659 Fragaria x ananassa
FAN03G1336 Fragaria x ananassa
FAN06G2075 Fragaria x ananassa
FAN06G2580 Fragaria x ananassa
FAN06G4384 Fragaria x ananassa
FAN06G5029 Fragaria x ananassa
FAN10G0075 Fragaria x ananassa
FAN10G4325 Fragaria x ananassa
FvH4_7g24380 Fragaria vesca
Glyma.11G229000 Glycine max
Glyma.18G028167 Glycine max
Glyma.18G028233 Glycine max
Gohir.A10G235300 Gossypium hirsutum
Gohir.D10G247700 Gossypium hirsutum
Gorai.011G286200 Gossypium raimondii
GSVIVG01032835001 Vitis vinifera
HanXRQChr13g0392111 Helianthus annuus
HanXRQChr14g0459831 Helianthus annuus
Haze_17219 Corylus avellana
Hma1.2p1_0703F.1_g206520 Hydrangea macrophylla
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla
HPP92_019878 Vanilla planifolia
HPP92_019887 Vanilla planifolia
Hund15944 Selenicereus undatus
Lalb_Chr15g0084151 Lupinus albus
Lj6g0015972 Lotus japonicus
Lj8A68G37 Lonicera japonica
Lsat_1_v5_gn_2_122921 Lactuca sativa
Manes.10G013600 Manihot esculenta
Mapoly0043s0044 Marchantia polymorpha
MCO09G726 Micromonas commoda
MD01G1152200 Malus domestica
MD07G1220900 Malus domestica
MD07G1221000 Malus domestica
MD07G1221200 Malus domestica
Medtr3g070390 Medicago truncatula
MELO3C025184.2 Cucumis melo
Migut.F01380 Erythranthe guttata
MSTRG.8325 Avicennia marina
Nitab4.5_0000395g0010 Nicotiana tabacum
Nitab4.5_0000395g0020 Nicotiana tabacum
Nitab4.5_0001171g0020 Nicotiana tabacum
Nitab4.5_0001171g0030 Nicotiana tabacum
Nitab4.5_0003886g0070 Nicotiana tabacum
Nitab4.5_0003886g0090 Nicotiana tabacum
Nn2g13702 Nelumbo nucifera
Oeu064386.1 Olea europaea
Os04g0608400 Oryza sativa ssp. japonica
Peaxi162Scf00825g00123 Petunia axillaris
PGR044G2440 Punica granatum
Phvul.001G242300 Phaseolus vulgaris
Potri.008G067600 Populus trichocarpa
Potri.010G189700 Populus trichocarpa
Pp3c6_24520 Physcomitrium patens
Prupe.2G249200 Prunus persica
Psat5g128120 Pisum sativum
PSO339G2908 Papaver somniferum
PSO384G3240 Papaver somniferum
QL08p063092 Quercus lobata
RcHm_v2.0_Chr1g0370081 Rosa chinensis
Rhsim09G0176800 Rhododendron simsii
Sabra08G0049700 Salix brachista
Sabra10G0146300 Salix brachista
Sc14g0005370 Simmondsia chinensis
Sc14g0005420 Simmondsia chinensis
Sed0009998 Sechium edule
SEGI_03850 Sequoiadendron giganteum
SEGI_27471 Sequoiadendron giganteum
SEGI_33727 Sequoiadendron giganteum
SEGI_35888 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25107 Striga asiatica
SHI03446 Sapria himalayana
Solyc11g008110.1 Solanum lycopersicum
Solyc11g008120.3 Solanum lycopersicum
Solyc11g020160.2 Solanum lycopersicum
Solyc11g020170.1 Solanum lycopersicum
Solyc11g020180.3 Solanum lycopersicum
Solyc11g020190.1 Solanum lycopersicum
Sopen11g010350 Solanum pennellii
Sp6g37210 Schrenkiella parvula
TAR369G0030 Trochodendron aralioides
THA.LOC104826852 Tarenaya hassleriana
Thecc.10G020000 Theobroma cacao
Thhalv10012715m.g Eutrema salsugineum
TPR.G2533 Trifolium pratense
unitig_0.g238 Utricularia gibba
vmacro10050 Vaccinium macrocarpon
vmacro10051 Vaccinium macrocarpon
vmacro22159 Vaccinium macrocarpon
VMungo1383G3500 Vigna mungo
Zm00001eb430560 Zea mays

User provided reference genes

Program Settings