Gene: PGR044G2440

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G2440
  • Transcript Identifier PGR044G2440.01
  • Gene Type Coding gene
  • Location NC_045134.1 : 2563814-2569511 : negative

Gene Family Information

  • ID HOM05D005539
  • #Genes/#Species 139/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031372438.1
  • name LOC116187686
  • name XM_031516578.1
  • id gene-LOC116187686
  • uniprot A0A218XRI0

Descriptions

  • product nuclear pore complex protein NUP88
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006611
ISO
PLAZA Integrative Orthologyprotein export from nucleus AT5G05680
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT5G05680
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT5G05680
GO:0000056
IEA
GOA Databaseribosomal small subunit export from nucleus
GO:0000056
IEA
InterProribosomal small subunit export from nucleus
GO:0000055
IEA
GOA Databaseribosomal large subunit export from nucleus
GO:0000055
IEA
InterProribosomal large subunit export from nucleus
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0051028
IEA
GOA DatabasemRNA transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G05680
GO:0005643
IEA
GOA Databasenuclear pore

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019321 Nucleoporin Nup88
IPR037700 Nucleoporin NUP88/NUP82
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
23.5.1.1.3.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.scaffold nucleoporin (NUP88)