Gene: Nitab4.5_0003886g0070

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003886g0070
  • Transcript Identifier Nitab4.5_0003886g0070.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003886 : 85544-95015 : positive

Gene Family Information

  • ID HOM05D005539
  • #Genes/#Species 139/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003886g0070.1
  • SR1-identifier Nta19g23850.5

Descriptions

  • Description WD40/YVTN repeat-like-containing domain, Nucleoporin Nup88, WD40-repeat-containing domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000055
IEA
InterProribosomal large subunit export from nucleus
GO:0000056
IEA
InterProribosomal small subunit export from nucleus
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT5G05680
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT5G05680
GO:0006611
ISO
PLAZA Integrative Orthologyprotein export from nucleus AT5G05680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G05680
GO:0005643
ISO
PLAZA Integrative Orthologynuclear pore AT5G05680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037700 Nucleoporin NUP88/NUP82
IPR019321 Nucleoporin Nup88
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
23.5.1.1.3.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.scaffold nucleoporin (NUP88)