Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03100 Brassica napus
Aa31LG3G15780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2684 Anthoceros agrestis
Ah.10g032240 Amaranthus hybridus
AL6G26410 Arabidopsis lyrata
Aqoxy3G02922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6ZV37H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP06NS Arachis hypogaea
AT5G15550 Arabidopsis thaliana
ATR0626G324 Amborella trichopoda
Atru.chr8.461 Acer truncatum
AUR62014946 Chenopodium quinoa
AUR62014947 Chenopodium quinoa
AUR62029195 Chenopodium quinoa
BcaB01g05044 Brassica carinata
BcaC03g18558 Brassica carinata
BolC9t58917H Brassica oleracea
BraA08t32798Z Brassica rapa
C02p07790 Brassica napus
C03p08200 Brassica napus
C09p61540 Brassica napus
CAN.G588.15 Capsicum annuum
CANSAT64G1484 Cannabis sativa
CARHR197750 Cardamine hirsuta
Carub.0006s1373 Capsella rubella
Ca_04302_v3 Cicer arietinum L.
CBR_g18642 Chara braunii
Cc07_g04170 Coffea canephora
CDE02G3404 Ceratophyllum demersum
Cfa007659 Carpinus fangiana
Cfa007661 Carpinus fangiana
Cfa009498 Carpinus fangiana
Ciclev10011739m.g Citrus clementina
CiPaw.04G056000 Carya illinoinensis
ClCG10G002410 Citrullus lanatus
COL.COLO4_07024 Corchorus olitorius
Cpa.g.sc14.169 Carica papaya
Cre17.g710100 Chlamydomonas reinhardtii
CsaV3_4G011930 Cucumis sativus L.
CSS0005994 Camellia sinensis var. sinensis
DCAR_011042 Daucus carota
Dinv33825 Davidia involucrata
Dinv34945 Davidia involucrata
Duzib187G1075 Durio zibethinus
ECA232G0694 Erigeron canadensis
EL10Ac2g03136 Beta vulgaris
Eucgr.I02026 Eucalyptus grandis
FAN02G1587 Fragaria x ananassa
FAN05G2519 Fragaria x ananassa
FAN14G5804 Fragaria x ananassa
FvH4_6g46921 Fragaria vesca
Glyma.01G086000 Glycine max
Glyma.05G027800 Glycine max
Glyma.13G056900 Glycine max
Glyma.19G029400 Glycine max
Gohir.A05G306101 Gossypium hirsutum
Gohir.A09G009900 Gossypium hirsutum
Gohir.A10G166950 Gossypium hirsutum
Gohir.A13G117650 Gossypium hirsutum
Gohir.D09G009000 Gossypium hirsutum
Gorai.006G010700 Gossypium raimondii
GSVIVG01032921001 Vitis vinifera
HanXRQChr17g0551711 Helianthus annuus
Haze_14435 Corylus avellana
HPP92_025853 Vanilla planifolia
HPP92_025854 Vanilla planifolia
Hund05300 Selenicereus undatus
Hund12433 Selenicereus undatus
Lalb_Chr02g0158951 Lupinus albus
Lj2g0000039 Lotus japonicus
Lj2g0016184 Lotus japonicus
Lj4A336G6 Lonicera japonica
Lj4C332G1 Lonicera japonica
Lsat_1_v5_gn_4_172421 Lactuca sativa
Lsat_1_v5_gn_5_138080 Lactuca sativa
Manes.02G054600 Manihot esculenta
Mapoly0212s0005 Marchantia polymorpha
MCO06G049 Micromonas commoda
MD09G1066100 Malus domestica
MD17G1058800 Malus domestica
Medtr7g099170 Medicago truncatula
MELO3C008857.2 Cucumis melo
Migut.K01277 Erythranthe guttata
MSTRG.3354 Avicennia marina
Nitab4.5_0003841g0090 Nicotiana tabacum
Nitab4.5_0017643g0010 Nicotiana tabacum
Nn4g23404 Nelumbo nucifera
Oeu007065.1 Olea europaea
Os07g0600400 Oryza sativa ssp. japonica
Peaxi162Scf00166g00526 Petunia axillaris
PGR083G1795 Punica granatum
PGSC0003DMG400001452 Solanum tuberosum
PGSC0003DMG400001639 Solanum tuberosum
Phvul.004G035400 Phaseolus vulgaris
Potri.017G093300 Populus trichocarpa
Pp3c23_13260 Physcomitrium patens
PRCOL_00003700 Prasinoderma coloniale
Prupe.3G255400 Prunus persica
Psat1g067800 Pisum sativum
PSO017G4331 Papaver somniferum
PSO478G0705 Papaver somniferum
QL10p049508 Quercus lobata
RcHm_v2.0_Chr2g0165901 Rosa chinensis
Rhsim10G0042800 Rhododendron simsii
Sabra04G0069200 Salix brachista
Sabra17G0082300 Salix brachista
SalBow1G3414 Salvia bowleyana
SalBow1G5707 Salvia bowleyana
SalBow5G5336 Salvia bowleyana
Sc10g0004650 Simmondsia chinensis
Sed0021649 Sechium edule
SEGI_38227 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31696 Striga asiatica
SGA_v2.0_scaffold148G36399 Striga asiatica
SHI01216 Sapria himalayana
SHI29385 Sapria himalayana
SHI29386 Sapria himalayana
SHI29392 Sapria himalayana
SMO172G0157 Selaginella moellendorffii
Solyc01g111030.2 Solanum lycopersicum
Solyc02g088780.4 Solanum lycopersicum
Sopen01g053090 Solanum pennellii
Sopen02g033500 Solanum pennellii
Sp6g28530 Schrenkiella parvula
TAR371G0059 Trochodendron aralioides
TAR622G0687 Trochodendron aralioides
TAR622G1292 Trochodendron aralioides
THA.LOC104820997 Tarenaya hassleriana
Thecc.04G094900 Theobroma cacao
Thhalv10013619m.g Eutrema salsugineum
TPR.G10015 Trifolium pratense
TPR.G17839 Trifolium pratense
TPR.G17852 Trifolium pratense
TWI32G0965 Tripterygium wilfordii
TWI34G1701 Tripterygium wilfordii
unitig_747.g21846 Utricularia gibba
vmacro05630 Vaccinium macrocarpon
VMungo0464G0521 Vigna mungo
Zm00001eb326820 Zea mays

User provided reference genes

Program Settings