Gene: FAN14G5804
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN14G5804
- Transcript Identifier FAN14G5804.1
- Gene Type Coding gene
- Location Fvb6-1 : 4341752-4353599 : negative
Gene Family Information
- ID HOM05D005508
- #Genes/#Species 139/97
- Phylogenetic origin
- ID ORTHO05D010430
- #Genes/#Species 63/51
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb6-1-augustus-gene-43.65.v1.0.a1
- pacid 50524247
Descriptions
- Description K01176 - alpha-amylase (E3.2.1.1, amyA, malS)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004556 | IEA | InterPro | alpha-amylase activity | |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G15550 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G15550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR012850 | Alpha-amylase, C-terminal beta-sheet |
| IPR012972 | NLE |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR006047 | Glycosyl hydrolase, family 13, catalytic domain |
| IPR017853 | Glycoside hydrolase superfamily |
| Mapman id | Description |
|---|---|
| 17.1.2.2.1.10.3 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component WDR12 |
| 3.2.3.3.1.1 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase |