Gene: PGR083G1795

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G1795
  • Transcript Identifier PGR083G1795.01
  • Gene Type Coding gene
  • Location NC_045133.1 : 18184567-18188051 : positive

Gene Family Information

  • ID HOM05D005508
  • #Genes/#Species 139/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031404557.1
  • name LOC116213673
  • name XM_031548697.1
  • id gene-LOC116213673
  • uniprot A0A218WQQ3

Descriptions

  • product ribosome biogenesis protein WDR12 homolog, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042273
IEA
GOA Databaseribosomal large subunit biogenesis
GO:0000463
IEA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466
IEA
GOA Databasematuration of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043021
IEA
GOA Databaseribonucleoprotein complex binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030687
IEA
GOA Databasepreribosome, large subunit precursor
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G15550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR012972 NLE
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
17.1.2.2.1.10.3 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component WDR12