Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p26670 Brassica napus
Aa31LG10G14040 Aethionema arabicum
Aa31LG3G16120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis
Actinidia04945 Actinidia chinensis
AL6G21610 Arabidopsis lyrata
Aqoxy3G03184 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea
AT5G11010 Arabidopsis thaliana
Atru.chr3.1308 Acer truncatum
Atru.chr9.2369 Acer truncatum
AUR62008313 Chenopodium quinoa
AUR62012293 Chenopodium quinoa
AUR62021784 Chenopodium quinoa
AUR62022932 Chenopodium quinoa
BcaC04g19267 Brassica carinata
BolC9t59405H Brassica oleracea
BraA10t44725Z Brassica rapa
C09p65840 Brassica napus
CAN.G999.3 Capsicum annuum
CANSAT80G2452 Cannabis sativa
CARHR202280 Cardamine hirsuta
Carub.0006s0951 Capsella rubella
Ca_18065_v3 Cicer arietinum L.
Cc04_g16070 Coffea canephora
CDE02G1640 Ceratophyllum demersum
Cfa019036 Carpinus fangiana
Ciclev10020622m.g Citrus clementina
CiPaw.11G034500 Carya illinoinensis
ClCG01G014230 Citrullus lanatus
COL.COLO4_07634 Corchorus olitorius
COL.COLO4_26552 Corchorus olitorius
Cpa.g.sc30.67 Carica papaya
Cre03.g168350 Chlamydomonas reinhardtii
CsaV3_1G008090 Cucumis sativus L.
CSS0010415 Camellia sinensis var. sinensis
CSS0047784 Camellia sinensis var. sinensis
DCAR_026093 Daucus carota
Dinv07986 Davidia involucrata
Dinv13115 Davidia involucrata
Dinv32660 Davidia involucrata
Duzib084G0032 Durio zibethinus
Duzib205G0238 Durio zibethinus
ECA247G2071 Erigeron canadensis
EL10Ac5g10874 Beta vulgaris
Eucgr.B00382 Eucalyptus grandis
FAN04G1682 Fragaria x ananassa
FAN08G3169 Fragaria x ananassa
FAN13G0712 Fragaria x ananassa
FAN18G0952 Fragaria x ananassa
FvH4_5g16020 Fragaria vesca
Glyma.04G177200 Glycine max
Glyma.05G004700 Glycine max
Glyma.06G187800 Glycine max
Glyma.19G005300 Glycine max
Gohir.A12G174400 Gossypium hirsutum
Gohir.D12G177100 Gossypium hirsutum
Gorai.008G189500 Gossypium raimondii
GSVIVG01008098001 Vitis vinifera
GSVIVG01008100001 Vitis vinifera
GSVIVG01008101001 Vitis vinifera
HanXRQChr02g0045331 Helianthus annuus
HanXRQChr16g0516751 Helianthus annuus
Haze_07413 Corylus avellana
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla
HPP92_006463 Vanilla planifolia
HPP92_008786 Vanilla planifolia
Hund09389 Selenicereus undatus
Lalb_Chr07g0182421 Lupinus albus
Lalb_Chr07g0182431 Lupinus albus
Lalb_Chr08g0236101 Lupinus albus
Lj1g0011553 Lotus japonicus
Lj4g0024662 Lotus japonicus
Lj5A118T79 Lonicera japonica
Lj5C118G23 Lonicera japonica
Lsat_1_v5_gn_1_11340 Lactuca sativa
Lsat_1_v5_gn_5_17360 Lactuca sativa
Manes.14G072100 Manihot esculenta
Mapoly0002s0051 Marchantia polymorpha
MD06G1183600 Malus domestica
MD14G1057100 Malus domestica
MD14G1189700 Malus domestica
Medtr8g080140 Medicago truncatula
Medtr8g080150 Medicago truncatula
MELO3C002226.2 Cucumis melo
Migut.D01889 Erythranthe guttata
Migut.N01938 Erythranthe guttata
MSTRG.9655 Avicennia marina
Nitab4.5_0000642g0180 Nicotiana tabacum
Nitab4.5_0009486g0030 Nicotiana tabacum
Nn3g17064 Nelumbo nucifera
Oeu038310.1 Olea europaea
Oeu038311.1 Olea europaea
Oeu039559.2 Olea europaea
Os01g0184000 Oryza sativa ssp. japonica
Os01g0354700 Oryza sativa ssp. japonica
Peaxi162Scf00017g02118 Petunia axillaris
PGSC0003DMG400024571 Solanum tuberosum
Phvul.004G010600 Phaseolus vulgaris
Phvul.009G054050 Phaseolus vulgaris
Phvul.009G054101 Phaseolus vulgaris
Potri.012G073500 Populus trichocarpa
Pp3c4_400 Physcomitrium patens
PRCOL_00002205 Prasinoderma coloniale
Prupe.5G182300 Prunus persica
Psat7g041440 Pisum sativum
Psat7g079600 Pisum sativum
PSO591G0251 Papaver somniferum
PSO832G2211 Papaver somniferum
QL10p014050 Quercus lobata
QL93p0205_0028 Quercus lobata
RcHm_v2.0_Chr7g0180051 Rosa chinensis
Rhsim08G0163400 Rhododendron simsii
Sabra12G0052300 Salix brachista
Sc12g0005880 Simmondsia chinensis
Sc12g0005890 Simmondsia chinensis
Sed0009281 Sechium edule
SEGI_00948 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31872 Striga asiatica
SGA_v2.0_scaffold7G04099 Striga asiatica
SHI07761 Sapria himalayana
Solyc03g113610.4 Solanum lycopersicum
Sopen03g032650 Solanum pennellii
Sp6g32480 Schrenkiella parvula
TAR622G0530 Trochodendron aralioides
TAR629G2056 Trochodendron aralioides
THA.LOC104814121 Tarenaya hassleriana
THA.LOC104818279 Tarenaya hassleriana
Thecc.10G120900 Theobroma cacao
Thhalv10000203m.g Eutrema salsugineum
Thhalv10015920m.g Eutrema salsugineum
TPR.G17080 Trifolium pratense
TWI09G1329 Tripterygium wilfordii
unitig_8.g3614 Utricularia gibba
vmacro19338 Vaccinium macrocarpon
VMungo0464G1007 Vigna mungo
VMungo1309G1734 Vigna mungo
Zm00001eb121920 Zea mays

User provided reference genes

Program Settings