Gene: Zm00001eb121920

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb121920
  • Transcript Identifier Zm00001eb121920_T001
  • Gene Type Coding gene
  • Location 3 : 8827127-8831039 : negative

Gene Family Information

  • ID HOM05D005494
  • #Genes/#Species 139/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb121920_T001
  • pid Zm00001eb121920_P001
  • uniprot B6TGY4
  • uniprot A0A1D6MIN7
  • uniprot A0A1D6MIN8
  • uniprot A0A3L6FBD4
  • uniprot A0A1D6MIN6
  • uniprot B4F862
  • entrez 100191258
  • refseq XM_008673786.1
  • refseq XP_008672008.1
  • V4_identifier Zm00001d039568

Descriptions

  • Description Zm00001e016654
  • Description Polynucleotide 5'-hydroxyl-kinase NOL9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006396
IBA
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0000448
IBA
GOA Databasecleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0051731
IBA
IEA
GOA Databasepolynucleotide 5'-hydroxyl-kinase activity
GO:0051731
IEA
InterPropolynucleotide 5'-hydroxyl-kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G11010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045116 Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3
IPR032319 Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
17.1.1.9.2 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS2 rRNA removal.polynucleotide kinase (GRC3)