Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p18950 Brassica napus
Aa31LG1G13640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.35 Anthoceros agrestis
Actinidia06861 Actinidia chinensis
Actinidia16276 Actinidia chinensis
Ah.15g099430 Amaranthus hybridus
AL6G32750 Arabidopsis lyrata
Aqoxy5G02307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MJD0TM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MU94NL Arachis hypogaea
AT5G21140 Arabidopsis thaliana
ATR0307G059 Amborella trichopoda
Atru.chr3.1122 Acer truncatum
Atru.chr3.1131 Acer truncatum
AUR62001615 Chenopodium quinoa
AUR62020162 Chenopodium quinoa
BcaB05g22770 Brassica carinata
BcaB08g36475 Brassica carinata
BcaC03g13834 Brassica carinata
BcaC03g13835 Brassica carinata
BcaC04g19522 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01110 Brassica napus
BNapus_Darmor_BZH_scaffold_38p01120 Brassica napus
BolC2t07100H Brassica oleracea
BolC2t07101H Brassica oleracea
BolC9t58356H Brassica oleracea
BraA02t05619Z Brassica rapa
BraA02t05620Z Brassica rapa
BraA10t43972Z Brassica rapa
C09p54930 Brassica napus
CAN.G140.42 Capsicum annuum
CANSAT54G2052 Cannabis sativa
CARHR191730 Cardamine hirsuta
CARHR258970 Cardamine hirsuta
Carub.0006s1945 Capsella rubella
Ca_16226_v3 Cicer arietinum L.
Ca_30133_v3 Cicer arietinum L.
CBR_g4478 Chara braunii
Cc01_g01860 Coffea canephora
CDE02G2011 Ceratophyllum demersum
Cfa013848 Carpinus fangiana
Ciclev10017900m.g Citrus clementina
CiPaw.07G159800 Carya illinoinensis
ClCG02G024200 Citrullus lanatus
COL.COLO4_18366 Corchorus olitorius
Cpa.g.sc103.64 Carica papaya
Cre03.g181650 Chlamydomonas reinhardtii
CsaV3_4G017330 Cucumis sativus L.
CSS0010626 Camellia sinensis var. sinensis
CSS0025534 Camellia sinensis var. sinensis
DCAR_024367 Daucus carota
DCAR_024368 Daucus carota
Dinv09746 Davidia involucrata
Dinv36333 Davidia involucrata
Duzib170G1145 Durio zibethinus
ECA248G0004 Erigeron canadensis
EL10Ac1g01677 Beta vulgaris
EL10Ac7g16203 Beta vulgaris
EL10Ac7g16205 Beta vulgaris
EL10Ac7g16209 Beta vulgaris
EL10Ac7g16212 Beta vulgaris
EL10Ac7g16214 Beta vulgaris
EL10Ac7g16216 Beta vulgaris
Eucgr.J00626 Eucalyptus grandis
FAN11G0079 Fragaria x ananassa
FAN16G3367 Fragaria x ananassa
FAN21G3982 Fragaria x ananassa
FAN25G1745 Fragaria x ananassa
FvH4_3g30540 Fragaria vesca
Glyma.20G050900 Glycine max
Gohir.A03G035066 Gossypium hirsutum
Gohir.D03G133200 Gossypium hirsutum
Gorai.003G140300 Gossypium raimondii
GSVIVG01037451001 Vitis vinifera
HanXRQChr01g0021191 Helianthus annuus
HanXRQChr08g0223711 Helianthus annuus
Haze_22522 Corylus avellana
Hma1.2p1_0143F.1_g064480 Hydrangea macrophylla
HPP92_018982 Vanilla planifolia
Hund20984 Selenicereus undatus
Lalb_Chr19g0127081 Lupinus albus
Lj2A553G20 Lonicera japonica
Lj6g0008952 Lotus japonicus
Lsat_1_v5_gn_1_68341 Lactuca sativa
Manes.04G053800 Manihot esculenta
Mapoly0185s0017 Marchantia polymorpha
MBI13_g02393_MAGBIO Magnolia biondii
MCO07G491 Micromonas commoda
MD11G1180700 Malus domestica
Medtr3g078850 Medicago truncatula
MELO3C014703.2 Cucumis melo
Migut.N02270 Erythranthe guttata
MSTRG.17554 Avicennia marina
Nitab4.5_0001568g0090 Nicotiana tabacum
Nitab4.5_0005132g0020 Nicotiana tabacum
Nn4g25074 Nelumbo nucifera
Oeu058539.1 Olea europaea
Os11g0130300 Oryza sativa ssp. japonica
Os12g0127100 Oryza sativa ssp. japonica
Peaxi162Scf00441g00618 Petunia axillaris
PGR119G0906 Punica granatum
PGSC0003DMG400032195 Solanum tuberosum
Phvul.L001837 Phaseolus vulgaris
Potri.004G195600 Populus trichocarpa
Pp3c20_10070 Physcomitrium patens
PRCOL_00005415 Prasinoderma coloniale
Prupe.6G153500 Prunus persica
Psat0s646g0040 Pisum sativum
PSO339G5547 Papaver somniferum
PSO384G1109 Papaver somniferum
QL93p0267_0015 Quercus lobata
RcHm_v2.0_Chr5g0056151 Rosa chinensis
RcHm_v2.0_Chr5g0056531 Rosa chinensis
RcHm_v2.0_Chr6g0256561 Rosa chinensis
Rhsim13G0228100 Rhododendron simsii
RhsimUnG0154800 Rhododendron simsii
Sabra04G0132800 Salix brachista
SalBow2G1218 Salvia bowleyana
Sc12g0000550 Simmondsia chinensis
Sed0007754 Sechium edule
SEGI_06155 Sequoiadendron giganteum
SEGI_19301 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01566 Striga asiatica
SHI25366 Sapria himalayana
SMO239G0090 Selaginella moellendorffii
Solyc01g006210.4 Solanum lycopersicum
Sopen01g002210 Solanum pennellii
Sp6g23380 Schrenkiella parvula
TAR623G1186 Trochodendron aralioides
THA.LOC104799054 Tarenaya hassleriana
Thecc.09G337500 Theobroma cacao
Thhalv10013965m.g Eutrema salsugineum
TPR.G28402 Trifolium pratense
TWI31G0083 Tripterygium wilfordii
TWI79G1618 Tripterygium wilfordii
unitig_60.g25792 Utricularia gibba
vmacro04253 Vaccinium macrocarpon
vmacro22428 Vaccinium macrocarpon
VMungo0540G2152 Vigna mungo
Zm00001eb199750 Zea mays
Zm00001eb405340 Zea mays

User provided reference genes

Program Settings