Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p19020 Brassica napus
Aa31LG5G7770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3233 Anthoceros agrestis
Actinidia07131 Actinidia chinensis
Actinidia07132 Actinidia chinensis
Actinidia24095 Actinidia chinensis
Actinidia24096 Actinidia chinensis
Actinidia28419 Actinidia chinensis
Actinidia28420 Actinidia chinensis
Ah.01g002830 Amaranthus hybridus
Ah.01g002840 Amaranthus hybridus
AL4G21570 Arabidopsis lyrata
Aqoxy1G01625 Aquilegia oxysepala
Aqoxy5G04136 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7B6ACI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HC1KPZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I533MD Arachis hypogaea
AT2G28450 Arabidopsis thaliana
ATR0115G037 Amborella trichopoda
Atru.chr3.3638 Acer truncatum
Atru.chr3.3639 Acer truncatum
AUR62024992 Chenopodium quinoa
AUR62039627 Chenopodium quinoa
BcaC01g02789 Brassica carinata
BcaC01g02790 Brassica carinata
BcaC01g02792 Brassica carinata
BcaC02g10959 Brassica carinata
BolC3t18293H Brassica oleracea
BolC3t18296H Brassica oleracea
BolC3t18299H Brassica oleracea
BolC4t23787H Brassica oleracea
BraA07t29607Z Brassica rapa
C03p60310 Brassica napus
C03p60350 Brassica napus
C03p60360 Brassica napus
C03p60390 Brassica napus
C04p22930 Brassica napus
CAN.G631.20 Capsicum annuum
CANSAT54G1801 Cannabis sativa
CARHR121390 Cardamine hirsuta
Carub.0004s0939 Capsella rubella
Ca_05253_v3 Cicer arietinum L.
CBR_g8736 Chara braunii
CBR_g8740 Chara braunii
Cc01_g11200 Coffea canephora
Cc01_g11210 Coffea canephora
CDE02G3164 Ceratophyllum demersum
CDE08G1578 Ceratophyllum demersum
Ciclev10027798m.g Citrus clementina
CiPaw.14G080100 Carya illinoinensis
ClCG02G021120 Citrullus lanatus
COL.COLO4_18342 Corchorus olitorius
Cpa.g.sc898.4 Carica papaya
Cre02.g101950 Chlamydomonas reinhardtii
CsaV3_6G013880 Cucumis sativus L.
CSS0008106 Camellia sinensis var. sinensis
CSS0041314 Camellia sinensis var. sinensis
DCAR_018815 Daucus carota
Dinv32755 Davidia involucrata
Duzib168G0972 Durio zibethinus
Duzib170G0010 Durio zibethinus
ECA233G6150 Erigeron canadensis
EL10Ac9g22502 Beta vulgaris
Eucgr.J00934 Eucalyptus grandis
FAN11G2629 Fragaria x ananassa
FAN16G3073 Fragaria x ananassa
FAN21G0488 Fragaria x ananassa
FAN25G3738 Fragaria x ananassa
FvH4_3g32530 Fragaria vesca
Glyma.11G147200 Glycine max
Glyma.12G068100 Glycine max
Gohir.A03G034400 Gossypium hirsutum
Gohir.D03G133900 Gossypium hirsutum
Gorai.003G141000 Gossypium raimondii
GSVIVG01025178001 Vitis vinifera
HanXRQChr13g0403491 Helianthus annuus
Haze_23841 Corylus avellana
Hma1.2p1_1031F.1_g249980 Hydrangea macrophylla
Hma1.2p1_1031F.1_g249990 Hydrangea macrophylla
HPP92_012655 Vanilla planifolia
Hund08141 Selenicereus undatus
Lalb_Chr01g0004271 Lupinus albus
Lalb_Chr19g0137331 Lupinus albus
Lj2A1029T35 Lonicera japonica
Lj3g0020359 Lotus japonicus
Lsat_1_v5_gn_6_46081 Lactuca sativa
Lsat_1_v5_gn_6_46101 Lactuca sativa
Manes.04G021900 Manihot esculenta
Mapoly0078s0012 Marchantia polymorpha
MBI10_g13354_MAGBIO Magnolia biondii
MD03G1116700 Malus domestica
MD11G1134700 Malus domestica
Medtr4g059550 Medicago truncatula
MELO3C025769.2 Cucumis melo
Migut.D02217 Erythranthe guttata
Nitab4.5_0000650g0150 Nicotiana tabacum
Nitab4.5_0003701g0010 Nicotiana tabacum
Nn2g10776 Nelumbo nucifera
Oeu002862.1 Olea europaea
Oeu002863.1 Olea europaea
Os04g0105000 Oryza sativa ssp. japonica
Peaxi162Scf00270g00915 Petunia axillaris
PGR119G0002 Punica granatum
Phvul.011G078600 Phaseolus vulgaris
Potri.009G013000 Populus trichocarpa
Pp3c10_16370 Physcomitrium patens
Prupe.6G100600 Prunus persica
Psat3g166520 Pisum sativum
Psat7g224200 Pisum sativum
PSO063G6738 Papaver somniferum
PSO339G1100 Papaver somniferum
QL01p022359 Quercus lobata
RcHm_v2.0_Chr5g0059591 Rosa chinensis
Rhsim13G0093900 Rhododendron simsii
Rhsim13G0156400 Rhododendron simsii
Sabra09G0008300 Salix brachista
SalBow3G2811 Salvia bowleyana
Sc06g0010080 Simmondsia chinensis
Sed0021600 Sechium edule
SEGI_24136 Sequoiadendron giganteum
SGA_v2.0_scaffold97G29223 Striga asiatica
SHI24573 Sapria himalayana
SMO184G0011 Selaginella moellendorffii
SMO340G0204 Selaginella moellendorffii
Solyc11g069340.2 Solanum lycopersicum
Sopen11g028060 Solanum pennellii
Sp4g11270 Schrenkiella parvula
TAR633G0045 Trochodendron aralioides
TAR636G1844 Trochodendron aralioides
TAR636G1890 Trochodendron aralioides
THA.LOC104800610 Tarenaya hassleriana
Thecc.03G060700 Theobroma cacao
Thecc.09G339700 Theobroma cacao
Thhalv10016347m.g Eutrema salsugineum
TPR.G15543 Trifolium pratense
TWI79G1139 Tripterygium wilfordii
unitig_899.g14913 Utricularia gibba
vmacro03193 Vaccinium macrocarpon
VMungo1127G2043 Vigna mungo
Zm00001eb089580 Zea mays
Zm00001eb418880 Zea mays

User provided reference genes

Program Settings