Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p38080 Brassica napus
Aa31LG3G4530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis
Actinidia05483 Actinidia chinensis
Ah.02g123390 Amaranthus hybridus
AL3G22740 Arabidopsis lyrata
Aqoxy6G01573 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea
AT3G11220 Arabidopsis thaliana
ATR0022G031 Amborella trichopoda
ATR1153G009 Amborella trichopoda
Atru.chr12.1050 Acer truncatum
AUR62003692 Chenopodium quinoa
AUR62018003 Chenopodium quinoa
BcaB06g25638 Brassica carinata
BcaC05g29390 Brassica carinata
BolC5t34351H Brassica oleracea
BraA05t22600Z Brassica rapa
C05p56870 Brassica napus
CAN.G1813.2 Capsicum annuum
CANSAT01G0836 Cannabis sativa
CARHR085780 Cardamine hirsuta
Carub.0003s1053 Capsella rubella
Ca_14799_v3 Cicer arietinum L.
Cc07_g13790 Coffea canephora
CDE04G2384 Ceratophyllum demersum
Cfa006855 Carpinus fangiana
Cfa025488 Carpinus fangiana
Ciclev10008278m.g Citrus clementina
Ciclev10008715m.g Citrus clementina
CiPaw.07G044400 Carya illinoinensis
CiPaw.07G044700 Carya illinoinensis
CiPaw.07G045000 Carya illinoinensis
CiPaw.07G045200 Carya illinoinensis
CiPaw.07G049700 Carya illinoinensis
ClCG01G018260 Citrullus lanatus
COL.COLO4_25710 Corchorus olitorius
Cpa.g.sc19.179 Carica papaya
Cre03.g196000 Chlamydomonas reinhardtii
CsaV3_6G044840 Cucumis sativus L.
CSS0002721 Camellia sinensis var. sinensis
CSS0016906 Camellia sinensis var. sinensis
CSS0017464 Camellia sinensis var. sinensis
CSS0026696 Camellia sinensis var. sinensis
CSS0046374 Camellia sinensis var. sinensis
DCAR_003438 Daucus carota
Dinv27014 Davidia involucrata
Dinv36960 Davidia involucrata
Duzib128G0185 Durio zibethinus
ECA233G4415 Erigeron canadensis
Eucgr.A00094 Eucalyptus grandis
FAN03G2380 Fragaria x ananassa
FAN19G2596 Fragaria x ananassa
FAN23G0357 Fragaria x ananassa
FAN23G0783 Fragaria x ananassa
FAN26G1496 Fragaria x ananassa
FvH4_1g19290 Fragaria vesca
FvH4_7g07230 Fragaria vesca
Glyma.03G108600 Glycine max
Glyma.13G008300 Glycine max
Gohir.A12G078265 Gossypium hirsutum
Gohir.D12G076300 Gossypium hirsutum
Gorai.008G084700 Gossypium raimondii
GSVIVG01003946001 Vitis vinifera
HanXRQChr08g0226671 Helianthus annuus
Haze_03908 Corylus avellana
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla
HPP92_008021 Vanilla planifolia
HPP92_008022 Vanilla planifolia
Hund14075 Selenicereus undatus
Lalb_Chr12g0210501 Lupinus albus
Lj2C525G9 Lonicera japonica
Lj2g0000099 Lotus japonicus
Lj3g0001207 Lotus japonicus
Lj6g0009802 Lotus japonicus
Lsat_1_v5_gn_1_79261 Lactuca sativa
Lsat_1_v5_gn_4_105120 Lactuca sativa
Lsat_1_v5_gn_4_67481 Lactuca sativa
Lsat_1_v5_gn_5_29040 Lactuca sativa
Lsat_1_v5_gn_6_15620 Lactuca sativa
Lsat_1_v5_gn_8_12861 Lactuca sativa
Manes.10G013400 Manihot esculenta
Mapoly0006s0234 Marchantia polymorpha
MBI03_g45376_MAGBIO Magnolia biondii
MBI03_g46739_MAGBIO Magnolia biondii
MBI10_g34777_MAGBIO Magnolia biondii
MCO12G220 Micromonas commoda
MD01G1042400 Malus domestica
MD01G1042700 Malus domestica
Medtr8g007340 Medicago truncatula
MELO3C007703.2 Cucumis melo
Migut.K00814 Erythranthe guttata
MSTRG.3723 Avicennia marina
Nitab4.5_0000402g0140 Nicotiana tabacum
Nn5g29815 Nelumbo nucifera
Os06g0639600 Oryza sativa ssp. japonica
Peaxi162Scf00085g00115 Petunia axillaris
PGR031G2068 Punica granatum
PGSC0003DMG400016186 Solanum tuberosum
Phvul.010G045900 Phaseolus vulgaris
Phvul.010G046100 Phaseolus vulgaris
Potri.010G189500 Populus trichocarpa
Pp3c15_22810 Physcomitrium patens
Pp3c9_23940 Physcomitrium patens
Prupe.1G076500 Prunus persica
Prupe.6G206700 Prunus persica
Psat4g223080 Pisum sativum
PSO013G0112 Papaver somniferum
PSO700G0130 Papaver somniferum
PSO761G0425 Papaver somniferum
PSO832G1169 Papaver somniferum
QL06p036434 Quercus lobata
RcHm_v2.0_Chr2g0110581 Rosa chinensis
RcHm_v2.0_Chr6g0270301 Rosa chinensis
RcHm_v2.0_Chr6g0270401 Rosa chinensis
Rhsim04G0113300 Rhododendron simsii
Sabra10G0146100 Salix brachista
SalBow5G3116 Salvia bowleyana
SalBow5G4670 Salvia bowleyana
Sc03g0000510 Simmondsia chinensis
Sed0026061 Sechium edule
SEGI_17743 Sequoiadendron giganteum
SEGI_40300 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17221 Striga asiatica
SHI03443 Sapria himalayana
SMO146G0066 Selaginella moellendorffii
Solyc11g010950.2 Solanum lycopersicum
Sopen11g005690 Solanum pennellii
Sp3g09500 Schrenkiella parvula
TAR625G0036 Trochodendron aralioides
THA.LOC104816551 Tarenaya hassleriana
Thecc.09G278800 Theobroma cacao
Thecc.10G018300 Theobroma cacao
Thhalv10021017m.g Eutrema salsugineum
TPR.G11130 Trifolium pratense
TPR.G5292 Trifolium pratense
TWI34G1275 Tripterygium wilfordii
unitig_0.g2648 Utricularia gibba
vmacro09003 Vaccinium macrocarpon
VMungo0331G1245 Vigna mungo
Zm00001eb387250 Zea mays

User provided reference genes

Program Settings