Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p00510 Brassica napus
A08p01180 Brassica napus
Aa31LG10G1260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1646 Anthoceros agrestis
Actinidia21790 Actinidia chinensis
Actinidia21791 Actinidia chinensis
Actinidia32189 Actinidia chinensis
Ah.08g216810 Amaranthus hybridus
AL1G62870 Arabidopsis lyrata
Aqoxy2G00145 Aquilegia oxysepala
Aqoxy3G00178 Aquilegia oxysepala
Aqoxy3G00203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K577WU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RX87J0 Arachis hypogaea
AT1G54150 Arabidopsis thaliana
ATR0598G333 Amborella trichopoda
Atru.chr1.3993 Acer truncatum
Atru.chr1.3994 Acer truncatum
AUR62001479 Chenopodium quinoa
AUR62009886 Chenopodium quinoa
BcaB04g17020 Brassica carinata
BcaB07g33256 Brassica carinata
BcaC01g01438 Brassica carinata
BcaC08g43595 Brassica carinata
BolC3t21521H Brassica oleracea
BolC6t36066H Brassica oleracea
BraA06t23266Z Brassica rapa
BraA08t32169Z Brassica rapa
C03p92030 Brassica napus
C06p09930 Brassica napus
CAN.G1080.1 Capsicum annuum
CAN.G1455.4 Capsicum annuum
CARHR044500 Cardamine hirsuta
Carub.0001s4339 Capsella rubella
Ca_23387_v3 Cicer arietinum L.
CBR_g17139 Chara braunii
Cc04_g01320 Coffea canephora
CDE05G1829 Ceratophyllum demersum
Cfa003530 Carpinus fangiana
Ciclev10025803m.g Citrus clementina
CiPaw.01G218300 Carya illinoinensis
ClCG09G000970 Citrullus lanatus
COL.COLO4_30752 Corchorus olitorius
Cpa.g.sc25.125 Carica papaya
CsaV3_7G034470 Cucumis sativus L.
CSS0027574 Camellia sinensis var. sinensis
CSS0036813 Camellia sinensis var. sinensis
CSS0046024 Camellia sinensis var. sinensis
DCAR_016124 Daucus carota
DCAR_022693 Daucus carota
DCAR_031911 Daucus carota
Dinv20432 Davidia involucrata
Dinv20433 Davidia involucrata
Duzib160G0528 Durio zibethinus
ECA234G4612 Erigeron canadensis
EL10Ac7g16412 Beta vulgaris
Eucgr.F04419 Eucalyptus grandis
Eucgr.I00478 Eucalyptus grandis
FAN05G5341 Fragaria x ananassa
FvH4_6g34790 Fragaria vesca
Glyma.03G080300 Glycine max
Glyma.16G008300 Glycine max
Glyma.18G149800 Glycine max
Gohir.A10G053500 Gossypium hirsutum
Gohir.D10G055300 Gossypium hirsutum
Gorai.011G059000 Gossypium raimondii
GSVIVG01016752001 Vitis vinifera
HanXRQChr12g0360301 Helianthus annuus
HanXRQChr12g0360331 Helianthus annuus
HanXRQChr12g0360351 Helianthus annuus
Haze_16035 Corylus avellana
Hma1.2p1_0291F.1_g115070 Hydrangea macrophylla
Hma1.2p1_0686F.1_g203410 Hydrangea macrophylla
HPP92_013292 Vanilla planifolia
Hund05737 Selenicereus undatus
Hund18689 Selenicereus undatus
Lalb_Chr04g0263541 Lupinus albus
Lj3g0015373 Lotus japonicus
Lj5A36G79 Lonicera japonica
Lsat_1_v5_gn_5_136241 Lactuca sativa
Lsat_1_v5_gn_5_136301 Lactuca sativa
Lsat_1_v5_gn_8_134000 Lactuca sativa
Manes.11G019800 Manihot esculenta
Mapoly0002s0144 Marchantia polymorpha
MCO16G513 Micromonas commoda
MD02G1089500 Malus domestica
MD09G1182600 Malus domestica
MD09G1182700 Malus domestica
MD09G1182800 Malus domestica
Medtr8g020850 Medicago truncatula
MELO3C024354.2 Cucumis melo
Migut.I01076 Erythranthe guttata
Nitab4.5_0000189g0150 Nicotiana tabacum
Nitab4.5_0001199g0030 Nicotiana tabacum
Nn6g34611 Nelumbo nucifera
Oeu015485.2 Olea europaea
Oeu020346.1 Olea europaea
Oeu020347.1 Olea europaea
Os03g0177300 Oryza sativa ssp. japonica
Peaxi162Scf00177g00417 Petunia axillaris
PGR119G1300 Punica granatum
PGSC0003DMG400014100 Solanum tuberosum
Phvul.010G129300 Phaseolus vulgaris
Potri.001G168700 Populus trichocarpa
Potri.003G065500 Populus trichocarpa
Pp3c13_6970 Physcomitrium patens
Pp3c16_12380 Physcomitrium patens
Pp3c3_320 Physcomitrium patens
Prupe.3G040200 Prunus persica
Psat0s741g0240 Pisum sativum
PSO135G0120 Papaver somniferum
PSO135G0621 Papaver somniferum
PSO135G0922 Papaver somniferum
PSO724G1224 Papaver somniferum
PSO724G1321 Papaver somniferum
QL05p004250 Quercus lobata
RcHm_v2.0_Chr2g0145651 Rosa chinensis
Rhsim08G0239400 Rhododendron simsii
Sabra03G0038500 Salix brachista
SalBow6G0331 Salvia bowleyana
SalBow6G0719 Salvia bowleyana
Sc10g0007910 Simmondsia chinensis
Sed0005660 Sechium edule
Sed0026793 Sechium edule
SEGI_21309 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33335 Striga asiatica
SGA_v2.0_scaffold71G23853 Striga asiatica
SMO118G0169 Selaginella moellendorffii
Solyc12g049330.2 Solanum lycopersicum
Sopen12g023810 Solanum pennellii
Sp1g40600 Schrenkiella parvula
TAR624G0147 Trochodendron aralioides
TAR624G1001 Trochodendron aralioides
THA.LOC104810366 Tarenaya hassleriana
Thecc.06G120800 Theobroma cacao
Thhalv10011564m.g Eutrema salsugineum
TPR.G36682 Trifolium pratense
TWI31G1192 Tripterygium wilfordii
TWI79G1442 Tripterygium wilfordii
vmacro15037 Vaccinium macrocarpon
VMungo0331G1542 Vigna mungo
Zm00001eb401910 Zea mays

User provided reference genes

Program Settings