Gene: Solyc12g049330.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g049330.2
  • Transcript Identifier Solyc12g049330.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 60494352-60497860 : negative

Gene Family Information

  • ID HOM05D005330
  • #Genes/#Species 142/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g049330.2.1
  • uniprot A0A3Q7JWI9
  • gene_id Solyc12g049330

Descriptions

  • Description E3 Ubiquitin ligase (AHRD V3.3 *** A0A2U1NTB6_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006996
IEA
GOA Databaseorganelle organization
GO:0006996
IEA
InterProorganelle organization
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G54150
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G54150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022170 E3 Ubiquitin ligase MUL1-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044247 E3 ubiquitin-protein ligase SPL2-like
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase